KAIKObase

Latest Announcements [Modification history]
  • Description pages were modified by adding one more tab of expression data with log10 conversion. (2020.09.09)
  • Enabled HTTPS access to KAIKObase (accessible by https://kaikobase.dna.affrc.go.jp/). (2020.09.03)
  • Updated keyword search (2020.07.22)
  • Fixed problems in BLAST Search (2020.07.09)
  • The latest update on KAIKObase (ver.4.0.0) is now available. (2019.12.27)
  • The new silkworm genome assembly and new predicted gene set (Kawamoto et al., 2019) are published. (2019.02.23)

KAIKObase is a silkworm genome database since 2009. We provide four data mining approaches:
  1. Search from linkage and physical map in Chromosome Overview
  2. Keyword and Position Search
  3. BLAST Search against silkworm genome and gene sets
  4. List of manually curated genes (Curated Genes)
Linkage map and physical map can be accessed by clicking the chromosome number.
It containing genome contigs, BAC-ends, SNP makers, and Fingerprint Contigs (FPC).

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Detoxification-related genesSilk production-related genesTarget genes of pesticides
ABC transporters
Carboxylesterase (COE)
Glutathione S-transferase (GST)
Cytochrome P450
Fibroin
Sericin
Gene list