KWMTBOMO12749

Position

Chromosome	Chr21
Start	13709380
End	13722881
Strand	+

view in Gbrowse: Chr21:13709380..13722881

Most similar sequence in NCBI nr database

Accession	Description	E-value	Score
XP_012544920.1	cytochrome P450 4C1 isoform X1	0.0	1019

ORF sequence (1488 bp)

ATGATTTGGACTGTAGTTGTATTGATTATTTTTATATTCTTGATATGGAAGGCTTTAGAGGATGAGGAGAATCCTCTTGACTCTCTTCCCGGACCAGAAAGGAAGCCGATCATTGGAGCCGCATTGCGATTCGTCAATTTAAATACAAGAGAAATGTTTATAAAATTGCGCGAGTACCATGCGATGTACGGTAATAGATTCGTTGTAAAGATATTCAAGAGGAGAGTCCTGCATCTGTCTAACGAAAAGGATGCTGAGGTCGTATTGTCGCATTCGAAGAACATTAAGAAAAGCAAGGGCTATACGTTTCTGAGTCCTTGGCTCGGCAGCGGTCTCCTGTTGAGCACCGGTTTTAAATGGCACAGCAGACGTAAGATTCTGACACCAACGTTTCACTTTAACATCTTGAAGAGCTTCTTAGAAATCATCAAGGACAAGAGTTGTGACTTGGTGAAGAGATTGGAGGAGTACAGGGGCGAAGAAGTAGACTTGATGCCCGTTATCAGCGACTTTACATTGTATACGATTTGCGAAACTGCAATGGGCACCCAATTGGATTCAGACAAGTCAGCAGAAACCAAGGAATACAAAATGGCCATACTACAAATAGCATCCTTGCTGCTCAACAGACTGACCAAAGTTTGGCTCCACAACGACTTAATATTCGACCAGCTTACAGTTGGGCGAAAGTTTCAGAAGTGCCTCAAACAAGTCCACTCTTTCGCCCATAATGTTATAGTTGAGAGGAAACGACAACGAGCATCTGGTAGAGACTATTCTGTCGTTGCAGAAGATGTATTCGGTCGTAAAAAGAGATTGGCCATGTTAGATCTTTTATTGGAAGCGGAAGAGAAAAATGAAATTGATTTTGAAGGAATAATGGATGAAGTTAATACATTTATGTTTGAGGGACACGACACAACTGCAGTCGCTTTAACGTTCAGTTTGATGTTGGTCGCGGAGGACGATCAAGTTCAAGATCGCATTTACAAGGAACTGCAAGGGATTTTTGGAGACTCTGACCGTCGGCCAACAATCAGTGATGTAGCCGAGATGAAGTACTTGGAAGCTGTAGTGAAGGAGACTCTGAGGCTGTATCCAAGTGTCCCGTTCATCGCTCGAGAGATCACTGAGGACTTTATGCTAGATGACCTAAACATAAAGAAAGGCTCAGAAGTAGTAGTCCACATATATGATCTGCATCGTCGTAAAGAGCTGTTTGCTGACCCCGAGAAGTTCCAGCCCGATAGATTCTTGAACGGAGAACTGAAGCATCCATACAGCTTCGTGCCCTTTAGCGCAGGACCAAGGAACTGTATTGGTCAACGCTTCGCGATGCTGGAAATGAAGTGCGTCCTCAGTGAGATCTGTCGTAGCTTCAGACTAGAACCCCGCACTAAGGGTTGGCGACCTACCCTCGTAGCGGAAATGCTTTTACGACCAAACGAACCTATTCATGTAAAGTTTATTAAACGCAAACAAAGCTGA

Protein sequence (495 aa)

MIWTVVVLIIFIFLIWKALEDEENPLDSLPGPERKPIIGAALRFVNLNTREMFIKLREYHAMYGNRFVVKIFKRRVLHLSNEKDAEVVLSHSKNIKKSKGYTFLSPWLGSGLLLSTGFKWHSRRKILTPTFHFNILKSFLEIIKDKSCDLVKRLEEYRGEEVDLMPVISDFTLYTICETAMGTQLDSDKSAETKEYKMAILQIASLLLNRLTKVWLHNDLIFDQLTVGRKFQKCLKQVHSFAHNVIVERKRQRASGRDYSVVAEDVFGRKKRLAMLDLLLEAEEKNEIDFEGIMDEVNTFMFEGHDTTAVALTFSLMLVAEDDQVQDRIYKELQGIFGDSDRRPTISDVAEMKYLEAVVKETLRLYPSVPFIAREITEDFMLDDLNIKKGSEVVVHIYDLHRRKELFADPEKFQPDRFLNGELKHPYSFVPFSAGPRNCIGQRFAMLEMKCVLSEICRSFRLEPRTKGWRPTLVAEMLLRPNEPIHVKFIKRKQS

Corresponding sequences in KAIKObase version 1

BMgn007195

Domains and motifs

Database	ID	Description	Start	End	Evalue	InterPro ID
PANTHER	PTHR24291	-	5	493	0.0	-
PANTHER	PTHR24291:SF105	-	5	493	0.0	-
SUPERFAMILY	SSF48264	-	25	493	1.0e-114	IPR036396
Gene3D	1.10.630.10	-	26	495	1.1e-121	IPR036396
Pfam	PF00067	Cytochrome P450	30	489	1.4e-110	IPR001128
ProSitePatterns	PS00086	Cytochrome P450 cysteine heme-iron ligand signature.	432	441	-	IPR017972

InterPro assignment

InterPro ID	InterPro description
IPR001128	Cytochrome P450
IPR017972	Cytochrome P450, conserved site
IPR036396	Cytochrome P450 superfamily

Gene ontology (GO) assignment

GO category	GO ID	GO description
molecular function	GO:0005506	iron ion binding
molecular function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular function	GO:0020037	heme binding
biological process	GO:0055114	oxidation-reduction process

Species	Accession
Danaus plexippus	DPOGS215094
Heliconius melpomene	HMEL005553-RA
Manduca sexta	XP_030026551.1
Plutella xylostella	g7977.t1
Spodoptera frugiperda (corn)	GSSPFG00001269001-PA GSSPFG00019109001-PA
Spodoptera frugiperda (rice)	SFRICE016313.2-PA SFRICE019005.2-PA
Acyrthosiphon pisum	-
Aedes aegypti	-
Anopheles gambiae	-
Apis mellifera	-
Drosophila melanogaster	-
Tribolium castaneum	-
Homo sapiens	-
Mus musculus	NP_598730.1

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value (transcripts per million (TPM))
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO12749:

Expression data of alternative splicing isoform(s) of KWMTBOMO12749:

MSTRG.11478.1 (position: Chr21:13705525..13723599)

MSTRG.11478.2 (position: Chr21:13705525..13722881)

MSTRG.11478.3 (position: Chr21:13705576..13723198)

MSTRG.11478.4 (position: Chr21:13705576..13723198)

MSTRG.11478.5 (position: Chr21:13708206..13722881)

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value with log₁₀ conversion (value of transcripts per million (TPM) plus 1 is used to avoid negative output)
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO12749:

Expression data of alternative splicing isoform(s) of KWMTBOMO12749:

MSTRG.11478.1 (position: Chr21:13705525..13723599)

MSTRG.11478.2 (position: Chr21:13705525..13722881)

MSTRG.11478.3 (position: Chr21:13705576..13723198)

MSTRG.11478.4 (position: Chr21:13705576..13723198)

MSTRG.11478.5 (position: Chr21:13708206..13722881)