KWMTBOMO10603

Position

ChromosomeChr17
Start15398385
End15407668
Strand+

view in Gbrowse: Chr17:15398385..15407668

Most similar sequence in NCBI nr database

AccessionDescriptionE-valueScore
NP_001108456.1cytochrome P450 9G30.01084

ORF sequence (1578 bp)

ATGCTCGTGGAAGTCATCGTATTTTTGATAACCACACTTGTTGCGTATTATTTATACGTTTACAAGAAAATACATTACTTCTACGATGCAAGAGGAGTCAAGTACCAACCAGGAATACCGGTTCTCGGTAATATTCTGAAAAGCTCATTGGGCACTGGTCATTTTTGGGAGGATATTGATAAGATATACAAAGCATTCCCTGGTGAGAGGTACATAGGTTACATCGAAGGCACAACTCCGATATTGATGATCAAAGACCCTGAGATCATCAAAAACATCACAGTGAGAGACTTTGATCATTTCGTGAACCACAAAGAATTCTTTCCCGTTGAAATCGACGCTTTGTTCGGAGGAAGCCTTTTCATGATGAAAGATGACAAATGGCGTGACATGAGAACAACCTTAAGTCCAGCATTCACGGGCTCTAAAATGCGGCTGATGTTACCGTTCATGATTGATATCAGCAAGAACATCGTGGAGTATCTTAAAGGTCATCAATTAGAAGATGTAGACGTAGATGATCTGATGCGCAGATACACGAATGACGTCATAGCCTCAGCCGGTTTCGGACTCCAGGTTAATTCGCTGGTCGACAAGGATAACGAATTCTACGAGTGTGGTCAAGCAATGTTTAGCACAAGTTGGCCACAGAGATTTAAAATGATATTGGCTGCACAGTTTCCAACGTTAGCCAAGAAAATAGGAATAAAAGTATTTCCACAAAAAGTAACTCGTTTCTTTAGAGAGATCGTGACCAGCACTATGGATTATAGATTGAAGAACAACGTAGAAAGACCGGATATGATTCAGCTACTGATGGATGCTTATAAAGGGACTCTTAAGAATGAGAGCAACGAATCAGACGAAAAAAATGTAGGTTTTGCTATGACAGAAGAGATGTTAAAACCAAAGGGGAATGTAAGAAAATGGACCCAAGACGAACTGACCGCACAAGTTTTCATCTTCTTCCTTGCGGGATTTGAAAGCTCGGCTAATGGTCTGACGCTTTGCATTCACGAACTCGCACTGAATCCTGAAGCTCAGGAAAAATTGTATGAGGCGATTATAAAGTTCAAGGAAGAGAAAGGACCGCTAACCTACGACAACATTGGAGAATTGAAATACTTAGATTGTGTTTTGAATGAGACTTCAAGAAAATGGTCTGCCGCAATAATAGTCGACAGGGTGTGCTCTAAACCATACGAGCTTCCACCGCCGAGGGAAGGGGGGAAACCTTATAAGCTTCAACCAGGAGATATAGTTTACAATTCTGTTAACTCCATCCAAATGGATCCCGAGCATCATCCTGACCCTGAGAAGTTTGACCCGGACAGATTCTTGGATGAAAATAAGCACAAAATCAAACCGTTTACTTTCCTGCCATTTGGTGCTGGACCAAGGAATTGCATTGGGTCAAGATTCGCACTTCTGGAGCTTAAAGTTTTAATCTACTATATAGTTCTGAATTTCAAAATAATAAAAACCGAGAAAACATTAAGCCCTATAAAACTTCAACCTGGCGAATTCAATATAAAAGTTTTGGGCGGGACATGGACTCAGTTCGAAGCTAGAGAATAA

Protein sequence (525 aa)

MLVEVIVFLITTLVAYYLYVYKKIHYFYDARGVKYQPGIPVLGNILKSSLGTGHFWEDIDKIYKAFPGERYIGYIEGTTPILMIKDPEIIKNITVRDFDHFVNHKEFFPVEIDALFGGSLFMMKDDKWRDMRTTLSPAFTGSKMRLMLPFMIDISKNIVEYLKGHQLEDVDVDDLMRRYTNDVIASAGFGLQVNSLVDKDNEFYECGQAMFSTSWPQRFKMILAAQFPTLAKKIGIKVFPQKVTRFFREIVTSTMDYRLKNNVERPDMIQLLMDAYKGTLKNESNESDEKNVGFAMTEEMLKPKGNVRKWTQDELTAQVFIFFLAGFESSANGLTLCIHELALNPEAQEKLYEAIIKFKEEKGPLTYDNIGELKYLDCVLNETSRKWSAAIIVDRVCSKPYELPPPREGGKPYKLQPGDIVYNSVNSIQMDPEHHPDPEKFDPDRFLDENKHKIKPFTFLPFGAGPRNCIGSRFALLELKVLIYYIVLNFKIIKTEKTLSPIKLQPGEFNIKVLGGTWTQFEARE

Corresponding sequences in KAIKObase version 1

BMgn003926

Domains and motifs

DatabaseIDDescriptionStartEndEvalueInterPro ID
Gene3D1.10.630.10- 155254.4e-126 IPR036396
PANTHERPTHR24292- 215220.0 -
PfamPF00067Cytochrome P450 364989.1e-76 IPR001128
SUPERFAMILYSSF48264- 375242.2e-101 IPR036396
ProSitePatternsPS00086Cytochrome P450 cysteine heme-iron ligand signature. 462471- IPR017972

InterPro assignment

InterPro IDInterPro description
IPR001128Cytochrome P450
IPR017972Cytochrome P450, conserved site
IPR036396Cytochrome P450 superfamily

Gene ontology (GO) assignment

GO categoryGO IDGO description
molecular functionGO:0005506iron ion binding
molecular functionGO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular functionGO:0020037heme binding
biological processGO:0055114oxidation-reduction process
SpeciesAccession
Danaus plexippusDPOGS202077
DPOGS202078
Heliconius melpomeneHMEL005629g1.t1
Manduca sextaXP_030034227.1
Plutella xylostellag28450.t1
Spodoptera frugiperda (corn)GSSPFG00008208001.5-PA
Spodoptera frugiperda (rice)SFRICE018009.2-PA
SFRICE018009.2-PC
Acyrthosiphon pisumXP_001946428.1
Aedes aegypti -
Anopheles gambiae -
Apis mellifera -
Drosophila melanogaster -
Tribolium castaneum -
Homo sapiens -
Mus musculus -

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value (transcripts per million (TPM))
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO10603:

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value with log10 conversion (value of transcripts per million (TPM) plus 1 is used to avoid negative output)
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO10603: