KWMTBOMO06852

Position

ChromosomeChr11
Start17603387
End17608186
Strand-

view in Gbrowse: Chr11:17603387..17608186

Most similar sequence in NCBI nr database

AccessionDescriptionE-valueScore
NP_001104007.1cytochrome P450, family 6, subfamily ab, polypeptide 50.01054

ORF sequence (1542 bp)

ATGTTTTTTTATCTACTAATTGTGATTTTAATAACATTGTATTACTATGGGGTTAGGACTTTTGATTACTGGAAGAAGAAGGGTGTCAATCATGATCCGCCGCTACCCTTCTTTGGAAATAATTTAAGACAGTTCATGCAAAAAGCCAGTATGGCAATGATGGCCACGGAGACGTACAAGAAATATCCTGAGGAGAAAGTGGTGGGTTTCTATCGAGGTACCTCACCTGAACTCGTGGTACGGGACCCTGAACTCATCAAGAGAATCCTCGTCACAGATTTCAGCAGCTTCTACGCAAGAGGCTTTAATCCACACAAAAAGGTAATAGAACCGTTACTTAAGAATTTGTTTTTTGCTGACGGCGATCTTTGGCGGTTGATAAGACAGAGATTCACTCCGGCTTTCAGTACCGCTAAATTAAAGGCAATGTTTCACATAATAACCGAACGTGCAGAAAAATTACAAATGATTGCGGAAAACGAGGCCTATGAAAATTTTTGCGACGTCAGGGAACTGATGGCCAGGTACACGACCGATTTTATAGGCGCATGTGGCTTTGGCTTAAATATTGACTCTTTGAGTGATGAGAACTCCCAATTCCGAAAACTTGGTAAGAGGATATTCAAAAGAGATCTCAGCGATGCAGTGCGTGCTGCCCTTAAATTAATGTTTCCGGAATTGTGTAAGCATTTAACGTTTCTGACGCCAGAGTTAGAAAAATCTATGACGTATTTAGTACAAAATGTGATACGCGAAAAGAATTACAAGCCCTCCGGAAGAAATGATTTCATAGATCTGATGCTTGAGCTCAAACAGAAGGGAAAATTACTCGGGGAGTCAATAGAAGCCAAGAACGCAAACGGAACACCAAAACAAGTTGAACTAGAATTCGATGACTTGCTGATGACGGCACAGGTCTTCGTTTTCTTCGGAGCTGGTTTCGAGACATCCTCGACCGCCTCGAGCTACACATTGCATCAATTGGCCTTCAATCCAGAGTGCCAAGAGAAAACACAAAAGGAAATCGATGAAGTTTTGAGCAAACACAACAACAAGATTACTTATGATGCTATCAAAGAGATGACATATTTAGAAATGGCATTTAACGAGGCAATGAGACTGTATCCATCAGTTGGATATTTGGTGAGGATGTGCACAGTACCTGAATATACGTTTCCGGAAATCAATTTGACTATCAACGAAGACGTAAAATTAATGATTCCGATTCAAGCTATACAGAAAGATGAAAAGTACTTCAAGGATCCTGAGAGGTTTCATCCTGAAAGGTTTAGCTCTGGCGCGAAAGCAAATTTGAAACCGTACACATTTTTGCCTTTTGGTGAAGGGCCACGGGCATGTGTTGGTGAAAGACTGGGTCAAATGCTGTCGATGGCGGGCTTAGTTGCTGTATTACAGAAATATACGGTAGAGCCCGTTGAGATCAGCCTACGAGACCCAATACCTGATCCTACCACAACCGTTTCTGAAGGCTTCGTCCATGGTCTACCTCTCAAGCTACGGAGAAGAGAACGCAGAATCTAG

Protein sequence (513 aa)

MFFYLLIVILITLYYYGVRTFDYWKKKGVNHDPPLPFFGNNLRQFMQKASMAMMATETYKKYPEEKVVGFYRGTSPELVVRDPELIKRILVTDFSSFYARGFNPHKKVIEPLLKNLFFADGDLWRLIRQRFTPAFSTAKLKAMFHIITERAEKLQMIAENEAYENFCDVRELMARYTTDFIGACGFGLNIDSLSDENSQFRKLGKRIFKRDLSDAVRAALKLMFPELCKHLTFLTPELEKSMTYLVQNVIREKNYKPSGRNDFIDLMLELKQKGKLLGESIEAKNANGTPKQVELEFDDLLMTAQVFVFFGAGFETSSTASSYTLHQLAFNPECQEKTQKEIDEVLSKHNNKITYDAIKEMTYLEMAFNEAMRLYPSVGYLVRMCTVPEYTFPEINLTINEDVKLMIPIQAIQKDEKYFKDPERFHPERFSSGAKANLKPYTFLPFGEGPRACVGERLGQMLSMAGLVAVLQKYTVEPVEISLRDPIPDPTTTVSEGFVHGLPLKLRRRERRI

Corresponding sequences in KAIKObase version 1

BMgn012089

Domains and motifs

DatabaseIDDescriptionStartEndEvalueInterPro ID
Gene3D1.10.630.10- 125097.3e-119 IPR036396
PANTHERPTHR24292- 194824.1e-129 -
PfamPF00067Cytochrome P450 334861.6e-89 IPR001128
SUPERFAMILYSSF48264- 335091.3e-98 IPR036396
ProSitePatternsPS00086Cytochrome P450 cysteine heme-iron ligand signature. 446455- IPR017972

InterPro assignment

InterPro IDInterPro description
IPR001128Cytochrome P450
IPR017972Cytochrome P450, conserved site
IPR036396Cytochrome P450 superfamily

Gene ontology (GO) assignment

GO categoryGO IDGO description
molecular functionGO:0005506iron ion binding
molecular functionGO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular functionGO:0020037heme binding
biological processGO:0055114oxidation-reduction process
SpeciesAccession
Danaus plexippusDPOGS207307
Heliconius melpomeneHMEL026005g1.t1
HMEL037654g1.t1
Manduca sextaXP_030035152.1
Plutella xylostellag25577.t1
Spodoptera frugiperda (corn)GSSPFG00017614001.2-PB
GSSPFG00017614001.2-PC
Spodoptera frugiperda (rice)SFRICE001707.2-PA
Acyrthosiphon pisum -
Aedes aegyptiAAEL008889-PA
AAEL009656-PA
AAEL014678-PA
AAEL014684-PA
AAEL025850-PA
Anopheles gambiaeAGAP008203-PA
AGAP008204-PA
AGAP012855-PA
Apis melliferaNP_001352128.1
NP_001352129.1
XP_006565062.2
XP_016771320.1
XP_026300532.1
XP_026300533.1
XP_026300534.1
XP_026300535.1
XP_395671.3
XP_397347.4
Drosophila melanogasterFBpp0084553
FBpp0085466
FBpp0086585
FBpp0086586
FBpp0289405
FBpp0308423
Tribolium castaneum -
Homo sapiens -
Mus musculus -

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value (transcripts per million (TPM))
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO06852:

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value with log10 conversion (value of transcripts per million (TPM) plus 1 is used to avoid negative output)
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO06852: