Position
| Chromosome | Chr25 |
| Start | 9114676 |
| End | 9119572 |
| Strand | + |
view in Gbrowse: Chr25:9114676..9119572
Most similar sequence in NCBI nr database
| Accession | Description | E-value | Score |
|---|---|---|---|
| NP_001037418.1 | glutathione S-transferase zeta 1 | 2e-159 | 448 |
ORF sequence (648 bp)
ATGGGCAAGCAGCCAGTATTATACTCATACTGGCGCAGCTCATGCTCCTGGCGAGTTCGCATAGCACTCAATCTTAAAGAAATACCATACGACATAAAGGCTGTCAGCCTGATTAAGGGAGGCGGAGAACAACACTGCAATGAGTATAGAGAAGTCAACCCTATGGAGCAAGTACCATCTTTATGCATTGATGGGCACACTCTAATTGAATCATTAAACATCATGCATTATTTAGAGGAGACAAGACCACAGAGACCTCTTATGCCGCAAGATTGCTTTAAGAGGGCAAAAGTTCGTGAAATTTGTGAAATGATAGCCTCAGGAATACAGCCATTGCAGAATCTGATTGTGCTAATTTATGTTGGTGAGGAGAAAAAGAAGGAATGGTCCCAACACTGGATCACAAGGGGCTTCAGAGCTATAGAAAAGTTGCTATCGACCACTGCCGGAAAATATTGTGTTGGTGATGAGATTACCCTTGCCGATTGCTGCTTAGTTCCACAAGTGTTCAATGCTAGAAGATTTCATGTTGATCTACGTCCGTTCCCAATCATCCTCCGCATAGACCGTGAACTGGAGAATCATCCCGCATTCCGTGCGGCTCATCCATCTTCTCAGCCAGATTGTCCTCCAGAAGTTGCTAAATGA
Protein sequence (215 aa)
MGKQPVLYSYWRSSCSWRVRIALNLKEIPYDIKAVSLIKGGGEQHCNEYREVNPMEQVPSLCIDGHTLIESLNIMHYLEETRPQRPLMPQDCFKRAKVREICEMIASGIQPLQNLIVLIYVGEEKKKEWSQHWITRGFRAIEKLLSTTAGKYCVGDEITLADCCLVPQVFNARRFHVDLRPFPIILRIDRELENHPAFRAAHPSSQPDCPPEVAK
Corresponding sequences in KAIKObase version 1
BMgn017175Domains and motifs
| Database | ID | Description | Start | End | Evalue | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | PS50404 | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 86 | 25.685 | IPR004045 |
| SUPERFAMILY | SSF52833 | - | 4 | 109 | 3.0e-23 | IPR036249 |
| CDD | cd03042 | GST_N_Zeta | 5 | 79 | 7.4e-40 | IPR034333 |
| PANTHER | PTHR42673 | - | 5 | 211 | 3.4e-82 | - |
| PANTHER | PTHR42673:SF4 | - | 5 | 211 | 3.4e-82 | - |
| Gene3D | 3.40.30.10 | - | 7 | 85 | 1.5e-26 | - |
| Pfam | PF13417 | Glutathione S-transferase, N-terminal domain | 7 | 86 | 2.2e-16 | IPR004045 |
| TIGRFAM | TIGR01262 | maiA: maleylacetoacetate isomerase | 7 | 209 | 3.1e-85 | IPR005955 |
| SUPERFAMILY | SSF47616 | - | 87 | 210 | 8.1e-35 | IPR036282 |
| Gene3D | 1.20.1050.10 | - | 89 | 214 | 6.3e-57 | - |
| ProSiteProfiles | PS50405 | Soluble glutathione S-transferase C-terminal domain profile. | 91 | 211 | 23.11 | IPR010987 |
| CDD | cd03191 | GST_C_Zeta | 93 | 206 | 3.2e-69 | IPR034330 |
| Pfam | PF14497 | Glutathione S-transferase, C-terminal domain | 124 | 198 | 9.1e-08 | IPR004046 |
InterPro assignment
| InterPro ID | InterPro description |
|---|---|
| IPR004045 | Glutathione S-transferase, N-terminal |
| IPR004046 | Glutathione S-transferase, C-terminal |
| IPR005955 | Glutathione S-transferases, class Zeta |
| IPR010987 | Glutathione S-transferase, C-terminal-like |
| IPR034330 | Glutathione S-transferases, class Zeta , C-terminal |
| IPR034333 | Glutathione S-transferases, class Zeta , N-terminal |
| IPR036249 | Thioredoxin-like superfamily |
| IPR036282 | Glutathione S-transferase, C-terminal domain superfamily |
Gene ontology (GO) assignment
| GO category | GO ID | GO description |
|---|---|---|
| molecular function | GO:0003824 | catalytic activity |
| molecular function | GO:0005515 | protein binding |
| cellular component | GO:0005737 | cytoplasm |
| biological process | GO:0009072 | aromatic amino acid family metabolic process |
| Species | Accession |
|---|---|
| Danaus plexippus | DPOGS214720 |
| Heliconius melpomene | HmelGSTz1.mrna |
| Manduca sexta | XP_030038169.1 |
| Plutella xylostella | g34203.t1 |
| Spodoptera frugiperda (corn) | GSSPFG00003663001.3-PA |
| Spodoptera frugiperda (rice) | SFRICE014027.2-PA |
| Acyrthosiphon pisum | XP_016663333.1 |
| Aedes aegypti | AAEL011934-PB |
| Anopheles gambiae | AGAP002898-PC AGAP002898-PD |
| Apis mellifera | XP_016767705.1 |
| Drosophila melanogaster | FBpp0081521 |
| Tribolium castaneum | XP_973541.3 |
| Homo sapiens | NP_665877.1 |
| Mus musculus | NP_001351235.1 |
The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.
The Y axis is the abundance value (transcripts per million (TPM))
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis
For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.
Expression data of KWMTBOMO15324:
Expression data of alternative splicing isoform(s) of KWMTBOMO15324:
MSTRG.14854.1 (position: Chr25:9114429..9119572)
MSTRG.14854.2 (position: Chr25:9114543..9119572)
MSTRG.14854.4 (position: Chr25:9114813..9119572)
The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.
The Y axis is the abundance value with log10 conversion (value of transcripts per million (TPM) plus 1 is used to avoid negative output)
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis
For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.
Expression data of KWMTBOMO15324:
Expression data of alternative splicing isoform(s) of KWMTBOMO15324:
MSTRG.14854.1 (position: Chr25:9114429..9119572)
MSTRG.14854.2 (position: Chr25:9114543..9119572)
MSTRG.14854.4 (position: Chr25:9114813..9119572)