KWMTBOMO11260

Overview
Annotation
Orthologs
Expression
Expression (Log conversion of TPMs)

Position

Chromosome	Chr19
Start	2085920
End	2089041
Strand	+

view in Gbrowse: Chr19:2085920..2089041

Most similar sequence in NCBI nr database

Accession	Description	E-value	Score
XP_028029361.1	glutathione S-transferase 2-like	6e-145	411

ORF sequence (690 bp)

ATGATGACTCGCAGCATCAAATTCACAGCTTCACAAGTAAATTCGGCGAAGAAACCTCCCATACTCTACGGAGATGAAGTATCTCCGCCCGTGAGATTTGTGATGATGACAGCAGCGCACCTCAACATTCAGTTGGATTTCCACCCAATTGATCTCTTTAAGTCTGAACACAAAATGGACGCTTTTAATCAGATTAATCCACTTCAAAAGGTGCCAGTGTTGAAAGTTGATAAAGATGTGATCTGTGACAGTCACGCTATTGCAATGTACCTTTGTGAAACTACTAAATCTGAAGATTTGTATCCAGGAAGTGCTTTGGCCAGGGCAAAAATAAATCAAATGCTTTTCTACAATGCGACAACTTTATTTCCAATTGACAGTTTCATACTTTCTGAATATTTTTGTGGAAAAATGCCATCTGGAGTTAAAGTTGATGAATGGTTTAATTCTCTGCATTACCTAAATACAGCTCTGTCGGTTTCTCCATGGCTCGCTGGAGATCAGATGAGGATTTGCGACTTTTGCTGTGCTTCCACCATTAGTTCCATGGAGACGGTCGTTAATGGAATCAAGAAATTTGTTTACTTGAAGAGGTGGATGGATGAATTGGAAAAACTACCTTGTTTTGAAATCAACAGACGTGGCTTAGAGCGATTGAAATATTTTATGAGTCTTTACAAGCCAAACTAA

Protein sequence (229 aa)

MMTRSIKFTASQVNSAKKPPILYGDEVSPPVRFVMMTAAHLNIQLDFHPIDLFKSEHKMDAFNQINPLQKVPVLKVDKDVICDSHAIAMYLCETTKSEDLYPGSALARAKINQMLFYNATTLFPIDSFILSEYFCGKMPSGVKVDEWFNSLHYLNTALSVSPWLAGDQMRICDFCCASTISSMETVVNGIKKFVYLKRWMDELEKLPCFEINRRGLERLKYFMSLYKPN

Corresponding sequences in KAIKObase version 1

BMgn016556

Domains and motifs

Database	ID	Description	Start	End	Evalue	InterPro ID
Gene3D	3.40.30.10	-	2	96	5.5e-21	-
SUPERFAMILY	SSF52833	-	16	102	3.7e-22	IPR036249
ProSiteProfiles	PS50404	Soluble glutathione S-transferase N-terminal domain profile.	18	99	19.723	IPR004045
PANTHER	PTHR43969	-	20	223	3.1e-46	-
Pfam	PF13417	Glutathione S-transferase, N-terminal domain	22	94	3.8e-13	IPR004045
SUPERFAMILY	SSF47616	-	90	209	1.8e-17	IPR036282
Gene3D	1.20.1050.10	-	97	227	9.6e-25	-
ProSiteProfiles	PS50405	Soluble glutathione S-transferase C-terminal domain profile.	104	222	11.076	IPR010987

InterPro assignment

InterPro ID	InterPro description
IPR004045	Glutathione S-transferase, N-terminal
IPR010987	Glutathione S-transferase, C-terminal-like
IPR036249	Thioredoxin-like superfamily
IPR036282	Glutathione S-transferase, C-terminal domain superfamily

Gene ontology (GO) assignment

GO category	GO ID	GO description
molecular function	GO:0005515	protein binding

Species	Accession
Danaus plexippus	-
Heliconius melpomene	HmelGSTe7.mrna
Manduca sexta	XP_030030115.1 XP_030030117.1
Plutella xylostella	g34692.t1
Spodoptera frugiperda (corn)	GSSPFG00007960001.5-PA
Spodoptera frugiperda (rice)	SFRICE003483.2-PA
Acyrthosiphon pisum	-
Aedes aegypti	-
Anopheles gambiae	-
Apis mellifera	-
Drosophila melanogaster	-
Tribolium castaneum	-
Homo sapiens	-
Mus musculus	-

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value (transcripts per million (TPM))
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO11260:

Expression data of alternative splicing isoform(s) of KWMTBOMO11260:

MSTRG.9135.1 (position: Chr19:2066553..2089179)

MSTRG.9135.2 (position: Chr19:2066560..2089179)

MSTRG.9135.3 (position: Chr19:2068934..2089187)

MSTRG.9135.4 (position: Chr19:2068936..2089187)