Position
| Chromosome | Chr28 |
| Start | 10402333 |
| End | 10413717 |
| Strand | - |
view in Gbrowse: Chr28:10402333..10413717
Most similar sequence in NCBI nr database
| Accession | Description | E-value | Score |
|---|---|---|---|
| XP_028035378.1 | esterase E4-like | 0.0 | 1169 |
ORF sequence (1686 bp)
ATGTTGTTGAAATTAATATTTATTTGTGCCATTGTGTATTATGCTGATGCTCATAAGAACAATAAGAAACAAACAGAAAAAAGACCAGCAGAGCCCGATGGCCCAGTGACCCGTTCACAATCTGGCTCATTCTTGGGCTCATGGATGGAGACACGTCGCGGAAAGCAGTTCCAGGCCTATAGGGGCATAAGATACGCTGAACCACCGGTCGGGAAACTACGATTCCAGCCCCCAAAACTAATTCGGCAATACAAAGAACGCGTTGACGCGAGCAAAGAGGGCCCGGCCTGCCCTCTGCCCGTCCCTCCCACTTACTACGTCGACGAAGACTGCCTGAGAATCAACGTGTATACTCCTAGTAACAATGTCTCGAAGCCTCTCCCTGTGATATTTTACATTCACGCCGGAGCGTTCTACTCCATGACGGGCAGGAGCGACCTGGCCGGACCTCACTACTTGCTGGACAGAGATCTGGTGCTCGTCACCATCAACTACAGGCTCGGCTCTTTAGGTTTTATAAGCACAGGCGACTCCCTGGCTCCTGGTAACAATGGGATGAAGGACCAAGTAGCCGCCCTGCGCTGGGTGCAGAGGAACATCAGAGCTTTTGGAGGAGATCCTGACTTAGTCACCATTGCCGGGTGCAGTGCTGGCTCTATCAGTGTGATGCTTCACATGATATCGCCTATGTCTAAAGGACTCTTCCACCGCGGTATATCGATGAGCGGGTCTCCGTTCGCGAGGGAGCCGCTACCGACAGAGCAGAAGAATCTGGCCATTCGTCAAGCCGAGATCCTCGACTGTCCTACCAACTCCAGCAAGGCCATCATGGACTGTCTCATGGCTAAAGATTGGAGGGAGATCGGAGATTCATTGCCAAAGTTCTTCGAATCCGGGCCGGGCGGGCCGGTGGGTATGTGGTGGCCGGTAGTGGAGGTGGATGCGGGCCAGGAGCGATTCTTGTCGGAGCAGCCCCTGGGCGTCCTCAGGTCGGGCCGCGCGCACACCGTGCCGCACATCATCAGCCAAACCAAGGACGAGTTCTTCTGGAAAGCTCCTCCGGTACTCCAGAACGAGACGCTGCTAGATGAATTAAACAACGACTGGGAGAACATAGCGCCCATATACTTCAGCTTGCCGCAAGAGAACCGGACGGCCGCGGTGAGGGAGCTGAGGGCGCAGTACCTCGGGGACGGCCCGCTGCGGAACGACGAGCGTTCCACCCGCGCCCTCGGCAGACTCTACGGAGACTCTATCATAGGGTTCGGCGTTCACAGAATGGTGAAGCTCATGAGTCGTCACTCGGAGTATCCAGTGTACTATTACGTGTTCAGCTACATCGGCAATAACAGCTATTACGTGGATCCTGGCACCGGGAAACCAGCTGGAGCTGCTCACCACGACGACACCATCTACGTGCTCACTCAGTCGTACCAGTTCCCCACCATACAGACGGACAGCCCCGACTCCCACGTCGTTGACGAGATGACTGCCATCTGGTACAACTTCGCTAGACACGGCGATCCAAACAACTGCGGCGACACCCCGGAGATCGGGGTCCGGTGGCCGGAGTACGACCCCGCCAAGCAGCAGTACCTGGACGTGGGAGACAGACTCACTGTCCGCAAAAACTACGCTGAAGACAGATTCCAGCTCTGGGATGAGCTATATCCTATACAATACTAA
Protein sequence (561 aa)
MLLKLIFICAIVYYADAHKNNKKQTEKRPAEPDGPVTRSQSGSFLGSWMETRRGKQFQAYRGIRYAEPPVGKLRFQPPKLIRQYKERVDASKEGPACPLPVPPTYYVDEDCLRINVYTPSNNVSKPLPVIFYIHAGAFYSMTGRSDLAGPHYLLDRDLVLVTINYRLGSLGFISTGDSLAPGNNGMKDQVAALRWVQRNIRAFGGDPDLVTIAGCSAGSISVMLHMISPMSKGLFHRGISMSGSPFAREPLPTEQKNLAIRQAEILDCPTNSSKAIMDCLMAKDWREIGDSLPKFFESGPGGPVGMWWPVVEVDAGQERFLSEQPLGVLRSGRAHTVPHIISQTKDEFFWKAPPVLQNETLLDELNNDWENIAPIYFSLPQENRTAAVRELRAQYLGDGPLRNDERSTRALGRLYGDSIIGFGVHRMVKLMSRHSEYPVYYYVFSYIGNNSYYVDPGTGKPAGAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVDEMTAIWYNFARHGDPNNCGDTPEIGVRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYPIQY
Corresponding sequences in KAIKObase version 1
BMgn013812Domains and motifs
| Database | ID | Description | Start | End | Evalue | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 3.40.50.1820 | - | 5 | 560 | 0.0 | IPR029058 |
| PANTHER | PTHR43142 | - | 22 | 558 | 0.0 | - |
| PANTHER | PTHR43142:SF1 | - | 22 | 558 | 0.0 | - |
| SUPERFAMILY | SSF53474 | - | 34 | 557 | 1.4e-124 | IPR029058 |
| Pfam | PF00135 | Carboxylesterase family | 35 | 553 | 2.7e-127 | IPR002018 |
| ProSitePatterns | PS00122 | Carboxylesterases type-B serine active site. | 203 | 218 | - | IPR019826 |
InterPro assignment
| InterPro ID | InterPro description |
|---|---|
| IPR002018 | Carboxylesterase, type B |
| IPR019826 | Carboxylesterase type B, active site |
| IPR029058 | Alpha/Beta hydrolase fold |
Gene ontology (GO) assignment
No GO ID
| Species | Accession |
|---|---|
| Danaus plexippus | DPOGS209311 DPOGS211843 |
| Heliconius melpomene | HMEL005882g1.t1 HMEL005882g2.t1 HMEL005882g3.t1 HMEL013381g1.t1 |
| Manduca sexta | XP_030028709.1 XP_030028710.1 |
| Plutella xylostella | - |
| Spodoptera frugiperda (corn) | GSSPFG00031867001.1-PA |
| Spodoptera frugiperda (rice) | SFRICE023343-PA SFRICE023357-PA SFRICE023373-PA |
| Acyrthosiphon pisum | - |
| Aedes aegypti | - |
| Anopheles gambiae | - |
| Apis mellifera | XP_393293.2 |
| Drosophila melanogaster | FBpp0081815 FBpp0113027 FBpp0307203 |
| Tribolium castaneum | - |
| Homo sapiens | - |
| Mus musculus | - |
The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.
The Y axis is the abundance value (transcripts per million (TPM))
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis
For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.
Expression data of KWMTBOMO16456:
Expression data of alternative splicing isoform(s) of KWMTBOMO16456:
MSTRG.16357.2 (position: Chr28:10402360..10412481)
The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.
The Y axis is the abundance value with log10 conversion (value of transcripts per million (TPM) plus 1 is used to avoid negative output)
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis
For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.
Expression data of KWMTBOMO16456:
Expression data of alternative splicing isoform(s) of KWMTBOMO16456:
MSTRG.16357.2 (position: Chr28:10402360..10412481)