KWMTBOMO13555

Position

ChromosomeChr23
Start1466243
End1470853
Strand+

view in Gbrowse: Chr23:1466243..1470853

Most similar sequence in NCBI nr database

AccessionDescriptionE-valueScore
NP_001104822.1alpha-esterase 450.01104

ORF sequence (1608 bp)

ATGGTCAAAGTAAAAGTAACGCAAGGCTGGTTGGAAGGCGAGGTGCTGGAGACCGTGACCGGGTATAGAAAGTACTATAGCTTCAAGGGTATTCCATATGCTGAACCTCCCTTAGGAAAACTCAGATTCAAGGCTCCGCGACCAGCGCTGCCCTGGGAGGGAGTCAAAAAAGCAACACAGCATGGACCTGTATGCCCTCAAGTGGACATCTTCACAGAAATCCTGATTCCGGGAAGTGAAGATTGTCTTTATTTAAACGTGTACACGCCCGAAATCAATTCTGAAACGCTCTTACCAGTCATGTTCTTCATCCATGGAGGTGGTTACAAGAGTGGCTCAGGAAATGTTGACAATTATGGACCCGACTTCCTTGTAGCCCACGGAATAGTATTAGTCACGATTAATTACAGACTTGACGCATTAGGATTCCTTTGCTTGGACACTGAAGAAGTGCCAGGAAATGCTGGTATGAAAGACCAAGTAGCTGCTTTAAAGTGGGTTAAAGAGAATATTTCAAGTTTTGGTGGAGATCCAGATAACATTACTGTGTTTGGTGAAAGTGCCGGTGGGGCGTCTACATCTTTCCACGTCATATCGCCGATGTCAAAAGGCTTGTTTAAAAGAGTGATTTCGATGAGCGGGGTCCTATTCTGTGATTGGTCCATAGCATTCGAACCAAGAAGAAGAGCGTTCAAACTTGGACAGCTTTTGGGAATTGAAACCGAGAATCCAGATGAATTACTCGAATATCTACAAAACGTTCCAGTAGAGAAATTAGTCAATACAGATCCTAACATAATAACAATGGAAGAACTACACAAAAATATGCTCAAATTTTATCATTTCACGCCAGTTGTCGAAAAAGATTTTGGTCAAGAACACTTTTTGACACGTGAACCAATTGAAGTCCTTAAACATGGAAATATTAATGATGTAGATATGCTATTAGGTTTCACAAATGAAGAAGCAATAATAGGAATAACGCTTTTAGAGAAACATCTAGTGCATTTGTACAATAAGTACATCGATTTGTTCGCACCTAGGTTGATAACAATTAAGGCGACACCAGATAAAGTCTTAGAAATATCCGACAGAATACGTCATTTTTATTTCGGCAATAAAAAGGTTAATTTAGAATCTATGAGGGAATTTGTCACGTTTGTTAACGACTGTGGATTTATATATCCCATTCACAGATTTGCGGGTAAATTGTCGGATCTAATTAATACGAAAGTTTTCATGTACAAATTTTCGATGTTTTCAAATCGAAATGTGTATGGTGCGGCCGGTGCTAATTACAAGATAACTGGGGCCTCGCATTTGGAAGATTTGATGTATCTGTTTGACGCCAAAAAATTTGACTTGAAGATTGAGACAACGAGCAGGGAATATCGTTTAATTAATCTGGCTTGCACAATTTTTACCAATTTTGCGAAATTTGGTAATCCAACACCGGACACATCTCTGGGAGTGAAGTGGCCAGAATACAATAAAGAGACAAGAAAATACTGCGACATCGGAGATGAGCTCACCATTGGACTGGATAACTACAGACAGACAGTCGACTTCTGGAAAAAAGTATATGAAGATGCCGGTCTAGAATTCTAA

Protein sequence (535 aa)

MVKVKVTQGWLEGEVLETVTGYRKYYSFKGIPYAEPPLGKLRFKAPRPALPWEGVKKATQHGPVCPQVDIFTEILIPGSEDCLYLNVYTPEINSETLLPVMFFIHGGGYKSGSGNVDNYGPDFLVAHGIVLVTINYRLDALGFLCLDTEEVPGNAGMKDQVAALKWVKENISSFGGDPDNITVFGESAGGASTSFHVISPMSKGLFKRVISMSGVLFCDWSIAFEPRRRAFKLGQLLGIETENPDELLEYLQNVPVEKLVNTDPNIITMEELHKNMLKFYHFTPVVEKDFGQEHFLTREPIEVLKHGNINDVDMLLGFTNEEAIIGITLLEKHLVHLYNKYIDLFAPRLITIKATPDKVLEISDRIRHFYFGNKKVNLESMREFVTFVNDCGFIYPIHRFAGKLSDLINTKVFMYKFSMFSNRNVYGAAGANYKITGASHLEDLMYLFDAKKFDLKIETTSREYRLINLACTIFTNFAKFGNPTPDTSLGVKWPEYNKETRKYCDIGDELTIGLDNYRQTVDFWKKVYEDAGLEF

Corresponding sequences in KAIKObase version 1

BMgn010987

Domains and motifs

DatabaseIDDescriptionStartEndEvalueInterPro ID
Gene3D3.40.50.1820- 15320.0 IPR029058
SUPERFAMILYSSF53474- 25280.0 IPR029058
PfamPF00135Carboxylesterase family 35240.0 IPR002018
PANTHERPTHR43142- 55300.0 -
PANTHERPTHR43142:SF1- 55300.0 -
ProSitePatternsPS00941Carboxylesterases type-B signature 2. 8090- IPR019819
ProSitePatternsPS00122Carboxylesterases type-B serine active site. 174189- IPR019826

InterPro assignment

InterPro IDInterPro description
IPR002018Carboxylesterase, type B
IPR019819Carboxylesterase type B, conserved site
IPR019826Carboxylesterase type B, active site
IPR029058Alpha/Beta hydrolase fold

Gene ontology (GO) assignment

No GO ID

SpeciesAccession
Danaus plexippus -
Heliconius melpomene -
Manduca sextaXP_030020800.1
XP_030020807.1
XP_030020814.1
XP_030020819.1
XP_030020827.1
Plutella xylostella -
Spodoptera frugiperda (corn)GSSPFG00001835001.3-PA
GSSPFG00003783001.3-PA
Spodoptera frugiperda (rice)SFRICE006032-PA
Acyrthosiphon pisum -
Aedes aegypti -
Anopheles gambiae -
Apis mellifera -
Drosophila melanogaster -
Tribolium castaneumXP_967916.2
Homo sapiensNP_001177130.1
NP_001177131.1
NP_001305435.1
NP_001351711.1
NP_776176.5
XP_011521323.1
XP_011521325.1
XP_011521326.1
XP_011521327.1
XP_011521328.1
XP_011521329.1
XP_011521330.1
XP_011521331.1
XP_011521332.1
XP_016878649.1
XP_016878650.1
XP_016878651.1
XP_016878652.1
XP_016878653.1
XP_016878654.1
XP_016878655.1
XP_016878657.1
XP_024306002.1
XP_024306003.1
Mus musculusNP_666325.2

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value (transcripts per million (TPM))
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO13555:

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value with log10 conversion (value of transcripts per million (TPM) plus 1 is used to avoid negative output)
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO13555: