KWMTBOMO11759

Position

ChromosomeChr19
Start14265701
End14270905
Strand+

view in Gbrowse: Chr19:14265701..14270905

Most similar sequence in NCBI nr database

AccessionDescriptionE-valueScore
XP_004924255.1cholinesterase 20.01121

ORF sequence (1704 bp)

ATGAATGAAAGGAAATCAAATACCAACATAGAAAGTGGTGTGGATGAAGATGCGTCGCAGCATGTGTGTGCGCCAAGTATTATGTGTGTGCGAGCGAAATGGTTAGTGCTGTGGTCGCTGTGGGCGGCGCGGCTGGTGCGTCAGCCCACAGCCACAGTACGGGTCAGCAACGGACTATTGCGGGGCGCCGTCGCACACGATGGCTCTCATTTACAATTCTTCGGCATACCATACGCCGCAACTGACACTGAACATAGATTCCAAAATCCAAACCCGGAACCGAAATGGGAGGGAGTCTTTGATGCTTACAACGAGCACATCAGGTGCTTCCAAAGATTTAGTCCCACCAGGATATCAGGACGGGAAGACTGCCTGACCCTAAACGTCTACACGCCTAATAACTATGACTCACTCCGCCCAGTCATGGTCTTCATTCACGGCGGAGGGTTCCGAGATGGCTCAGCATCTCCATTTATGTACGGCTCTGAATATCTAACAAGACACGGAGTAGTACTAGTTACAATCAATTACAGGCTGGAGGTTTTAGGATTTTTATGTCTAGGTATTAAAGAAGCACCCGGTAATGTTGGTTTGAAGGACCAGGTCGCAGCTTTGAGATGGATCAAGACAAACATCAGGGCGTTTGGAGGAGATCCTGATAATATTACGATTTTCGGAGAGAGTGCCGGTTCTGCTTCAGTTATGTACCACATGCTAACTCCGATGTCTAGAGGATTATTCAACAAAGCTATTTTGCAAAGCGGTTCAGCCATTACTCCTTGGAGTTTTCAATTCGAGCCCTTAAAGACTGCTAGTTTATTGGCAAAAAGCATGGGCGTCAAAACTGAAGATCCATATGAACTATATAAGCTATTTGCCAACATGCCTGCCGAAGAATTGTTGAAAACAAGAGTGCCGAGACGGAAAGGAGATATAGTGTTATCCGAAAATATATTCGTACCGTGTGTAGATAAAGAAATAGAAGGTATGGAACGATTCTTGCCAGATACGCCAATAAACTTAATTTCCAACAACCAATATCAAAAGGTACCAGTTATAATTGGCTTCAATAATGCCGAAGGTTACCTGTTCGCTGGAAAAGAAAATGAGACTACTCTAGCTAATTTCAAAATCTATAACGCTCTGCCCAGAGATTTGATATTCCCGACTGAGGACGAAAAAAATGAGACTGTGAATAGGCTCAGGGGACTTTACTCTATTCGCAGACCCGAAGATTACCTTAAAAACATTGCCAAATACGAAGGAGATACCAGCATCACATATCCTACTATAGCCAGTATAGGTCTTCTGTCTAAATCCATGGATGGATTAATTTATGCCTACAAATTGTGTTACGACGGATGGCTCAATATACCGAAATGGTATTTTGGTTTCCGTAAATATCCCGGCGCGGCTCACGCAGACGAACTATTCTATTTATTCAAAGTCAAAGTGCCTTTGGTTATGGAGTTCATCGAAATTGAATTTATAAAAAAAATTACAATGCTTTGGACAAATTTCGCTAAATTTGGAAACCCAACACCCTTTCCGTCTTCTACACTTCCTGTGACATGGAAGCCCTTCAAAACGAGCGATCCAAAGATATTGGTCATAGACAAACAATTCTCGGAGGAGAGTCTTTGGAGCGACGAAGTCATGCTCTACTGGGACACCATCTACACTAAATATAGACGGAAGCTTTGA

Protein sequence (567 aa)

MNERKSNTNIESGVDEDASQHVCAPSIMCVRAKWLVLWSLWAARLVRQPTATVRVSNGLLRGAVAHDGSHLQFFGIPYAATDTEHRFQNPNPEPKWEGVFDAYNEHIRCFQRFSPTRISGREDCLTLNVYTPNNYDSLRPVMVFIHGGGFRDGSASPFMYGSEYLTRHGVVLVTINYRLEVLGFLCLGIKEAPGNVGLKDQVAALRWIKTNIRAFGGDPDNITIFGESAGSASVMYHMLTPMSRGLFNKAILQSGSAITPWSFQFEPLKTASLLAKSMGVKTEDPYELYKLFANMPAEELLKTRVPRRKGDIVLSENIFVPCVDKEIEGMERFLPDTPINLISNNQYQKVPVIIGFNNAEGYLFAGKENETTLANFKIYNALPRDLIFPTEDEKNETVNRLRGLYSIRRPEDYLKNIAKYEGDTSITYPTIASIGLLSKSMDGLIYAYKLCYDGWLNIPKWYFGFRKYPGAAHADELFYLFKVKVPLVMEFIEIEFIKKITMLWTNFAKFGNPTPFPSSTLPVTWKPFKTSDPKILVIDKQFSEESLWSDEVMLYWDTIYTKYRRKL

Corresponding sequences in KAIKObase version 1

BMgn004205

Domains and motifs

DatabaseIDDescriptionStartEndEvalueInterPro ID
Gene3D3.40.50.1820- 235671.7e-139 IPR029058
PANTHERPTHR43142- 505663.2e-130 -
PANTHERPTHR43142:SF1- 505663.2e-130 -
PfamPF00135Carboxylesterase family 515434.9e-122 IPR002018
SUPERFAMILYSSF53474- 515608.0e-114 IPR029058
ProSitePatternsPS00941Carboxylesterases type-B signature 2. 122132- IPR019819
ProSitePatternsPS00122Carboxylesterases type-B serine active site. 215230- IPR019826

InterPro assignment

InterPro IDInterPro description
IPR002018Carboxylesterase, type B
IPR019819Carboxylesterase type B, conserved site
IPR019826Carboxylesterase type B, active site
IPR029058Alpha/Beta hydrolase fold

Gene ontology (GO) assignment

No GO ID

SpeciesAccession
Danaus plexippusDPOGS209884
DPOGS209909
Heliconius melpomeneHMEL032312g1.t1
Manduca sextaXP_030034317.1
Plutella xylostella -
Spodoptera frugiperda (corn)GSSPFG00034240001.3-PA
Spodoptera frugiperda (rice)SFRICE020547.2-PA
Acyrthosiphon pisum -
Aedes aegypti -
Anopheles gambiae -
Apis mellifera -
Drosophila melanogaster -
Tribolium castaneum -
Homo sapiens -
Mus musculusNP_034015.1

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value (transcripts per million (TPM))
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO11759:

Expression data of alternative splicing isoform(s) of KWMTBOMO11759:

MSTRG.9728.1 (position: Chr19:14265529..14271164)

MSTRG.9728.2 (position: Chr19:14265657..14271164)

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value with log10 conversion (value of transcripts per million (TPM) plus 1 is used to avoid negative output)
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO11759:

Expression data of alternative splicing isoform(s) of KWMTBOMO11759:

MSTRG.9728.1 (position: Chr19:14265529..14271164)

MSTRG.9728.2 (position: Chr19:14265657..14271164)