KWMTBOMO09140

Position

ChromosomeChr15
Start11980961
End11983938
Strand+

view in Gbrowse: Chr15:11980961..11983938

Most similar sequence in NCBI nr database

AccessionDescriptionE-valueScore
XP_004924612.1esterase FE40.01137

ORF sequence (1653 bp)

ATGTTGATAAAGACGTTCTTTGTGATCGCGTCTGTTGTCTATGTTCTGGGACATCACGATGGGGACTTGTCGAGAATAGTCCACACAGACCAAGGCCCCGTGAGAGGTTACAAGGACGACACAGGAGATATTTTTGTTTTCTACAATATACCCTACGCGACCACCCCTACCGGAGTAGACCGATACAAGGCACCTTTACCACCGCCAACATGGTCGGAGCCTTTCGAAGCTGTTAACCGAGATATAGTTTGTCCGCAACATGACGCAGGAATTTCCGGTTTAAATGTAAAAATGCAAGAAGACTGCTTGATTGCAAACATACACGTACCTGTAACAGACGAGAAGAATCTGCCGGTCCTCGTCTATGTACACGGAGGTGCTTTTCAAATTGGATACGGCAATAAACTATCTCCAAAAAAACTTATCCAAACGAAGAATTTAATCGTCGTTACATTTAATTACCGTTTAGGGATTCACGGTTTTTTGTGTCTTGGTACAGAAGACGCACCAGGTAACGCAGGCATTAAGGATCAAGTGGCACTCTTGCGTTGGGTGAACAGAAACATCGCCAGCTTCGGCGGTAATCCTAATGATGTTACTATAGCGGGCTGCAGTGCCGGTTCGTCTTCCGTAGATCTGTTGATGCTATCAGACACCACGAAGGGATTATTCAATAAGGTTATCGCAGGTAGCGGTGCCAGCTTAAGTGGTTTCAGCGTGCAAATAGACCCTCTGGGATCTGCTCAAGAGCAGGGTTTAGTGTTAAACTTCACAAACGTGGAAGACATAGCTGCTCTTGGAGAATCTTATAAAAATATCCCAATTGAAAAGTTACTTTTAACAAATTTTAGAAACAGAAAACATTCTGGAGTCGAATTCGCTCCTTGTGTAGAACGAGACATAGGACAAGAAATGTTTCTCAAGGAGGCGCCAATTGACATTTTGAAAAAAGGCGATTATCCGAAAATGCCTATTATTTATGGCTTTACGAGTATGGAAGGTTTGATAAGACGACCGTTCTTTGAGGAATGGAAAGATGAAATGAACGAAAAGTTTTCGAACTTTTTATCAATCGATCTACAATTTGATAATGAACAGGAAAGAGAGGAAGTTGCAGCTAAAATAAAACAATTCTATTTCGGCGACGCTGAAGTTTCAGGCGATACAATTTTGAATTTTATCAACTACTTCACAGATGTCATGTTCTCTTACTCGATGCTCTGGTCAGTTCAGCTACATACAAGAAATGGTAACGACCAGGTGTACCTGTACGAATATTCATATGTCGACGATGATGTACCTATAATTCCGTACACCAATGTTCGTGGCGCTGAGCATTGCGCTCAAAATAATGCATTGCTTGATGGAAGAAGTTCAACTCTTTCAGATGAGACTAACATTTCAGATGGCTTCAGAGCTATTAAGAAAATAATGAGAGAGATGTGGTCTAACTTTATAACTACTGGGCAACCAGTTCCAGCAAATTCATCACTGCCCTCCTGGCCGCCAGCAAACGAGTACAGGACTCCGCACATGTCTTTTGGTTTCAACGTAGAACTGAAAGGAATATTGCTCGAACCACGATTTCGCTTCTGGGATGAAATATACGATAAGCACTATCGTACTCCCAAATCTCCCGCAATTCCTAATTAA

Protein sequence (550 aa)

MLIKTFFVIASVVYVLGHHDGDLSRIVHTDQGPVRGYKDDTGDIFVFYNIPYATTPTGVDRYKAPLPPPTWSEPFEAVNRDIVCPQHDAGISGLNVKMQEDCLIANIHVPVTDEKNLPVLVYVHGGAFQIGYGNKLSPKKLIQTKNLIVVTFNYRLGIHGFLCLGTEDAPGNAGIKDQVALLRWVNRNIASFGGNPNDVTIAGCSAGSSSVDLLMLSDTTKGLFNKVIAGSGASLSGFSVQIDPLGSAQEQGLVLNFTNVEDIAALGESYKNIPIEKLLLTNFRNRKHSGVEFAPCVERDIGQEMFLKEAPIDILKKGDYPKMPIIYGFTSMEGLIRRPFFEEWKDEMNEKFSNFLSIDLQFDNEQEREEVAAKIKQFYFGDAEVSGDTILNFINYFTDVMFSYSMLWSVQLHTRNGNDQVYLYEYSYVDDDVPIIPYTNVRGAEHCAQNNALLDGRSSTLSDETNISDGFRAIKKIMREMWSNFITTGQPVPANSSLPSWPPANEYRTPHMSFGFNVELKGILLEPRFRFWDEIYDKHYRTPKSPAIPN

Corresponding sequences in KAIKObase version 1

BMgn007546

Domains and motifs

DatabaseIDDescriptionStartEndEvalueInterPro ID
Gene3D3.40.50.1820- 55422.3e-127 IPR029058
PfamPF00135Carboxylesterase family 255321.5e-112 IPR002018
SUPERFAMILYSSF53474- 255391.2e-101 IPR029058
PANTHERPTHR43142- 275401.4e-108 -
ProSitePatternsPS00122Carboxylesterases type-B serine active site. 192207- IPR019826

InterPro assignment

InterPro IDInterPro description
IPR002018Carboxylesterase, type B
IPR019826Carboxylesterase type B, active site
IPR029058Alpha/Beta hydrolase fold

Gene ontology (GO) assignment

No GO ID

SpeciesAccession
Danaus plexippus -
Heliconius melpomeneHMEL003326g1.t1
Manduca sextaXP_030027741.1
Plutella xylostella -
Spodoptera frugiperda (corn) -
Spodoptera frugiperda (rice) -
Acyrthosiphon pisum -
Aedes aegypti -
Anopheles gambiae -
Apis mellifera -
Drosophila melanogaster -
Tribolium castaneum -
Homo sapiens -
Mus musculus -

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value (transcripts per million (TPM))
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO09140:

Expression data of alternative splicing isoform(s) of KWMTBOMO09140:

MSTRG.6429.1 (position: Chr15:11975153..11983848)

MSTRG.6429.2 (position: Chr15:11980597..11984782)

MSTRG.6429.3 (position: Chr15:11980597..11983938)

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value with log10 conversion (value of transcripts per million (TPM) plus 1 is used to avoid negative output)
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO09140:

Expression data of alternative splicing isoform(s) of KWMTBOMO09140:

MSTRG.6429.1 (position: Chr15:11975153..11983848)

MSTRG.6429.2 (position: Chr15:11980597..11984782)

MSTRG.6429.3 (position: Chr15:11980597..11983938)