KWMTBOMO07385

Position

ChromosomeChr12
Start11675940
End11683799
Strand-

view in Gbrowse: Chr12:11675940..11683799

Most similar sequence in NCBI nr database

AccessionDescriptionE-valueScore
XP_028034249.1venom carboxylesterase-6-like0.01062

ORF sequence (1569 bp)

ATGTCTTTGACTCACGTCGAACAAGGAACACTGGAGGGTGTTGTTTGTGATAATGGAAAATACGTGGCGTTTAAAGGAATACCGTATGCTAAACCACCACTCGGAAAATTAAGATTCAAAGCCCCAGAACCACCTGAGCCTTGGGACGGTATCAGAAATGCTAACGAACATGGCCCGATATGTCCACAATACAACGAAAGAATGAACAGAATCGAAGATGGCAGTGAAGATTGTCTCTATCTCAACGTGTATTCTAAAAATCTGAAACCGACCACACCTCTTCCAGTCATGGTTTGGATACATGGTGGAGGTTTCTATACGGGATCGGGAAACTCTGAATTTTATGGGCCAGATTTTTTCATGGAACATGAGGTAATACTCGTGACACTTAACTACAGACTAGAAGTTCTAGGGTTCTTGTGTCTAGACAATGAAGAAGTTCCAGGAAACGCTGGGCTCAAAGATCAAGTGGCCGCTTTGAAGTGGATTAAACAAAATATCGCTGCATTCGGGGGAGACAAAAACAATATTACACTTTTTGGGTGCAGTGCAGGGTCGGCCTCAACATCTCTGCATTTAGTATCCGATATGAGCAAAGGACTATTCGACAAAGCCATTTGTCAAAGTGGTGTTTGTTTAAATGAATGGGCATACAATTTATATGCACGCGAAAGAGCCTTCCAGTTGGGTAAACTCTTGGGGAAAGAAACTGAAGACGAAATTGAATTACTAGAATTTTTAAGAAGCATTCCTGCTTCTTCGCTTGTCAACAACGAACTGCCATATCTTCAAATAAATAACATAGATTTAGTAGACAATATAAAGTTCGGACCGGTAATAGAAAATCCAAATCTCAATGTTGAAAAGTTTCTCAACGAATCACCGGTTAACTTAGTTAAAAAAGGACATTTGGCAAATATACCCCTAATTTTGGGATACACCTCAGGGGAAGGAATAGAAATTGTCAGAAACCTTCCCCGTATTGTCAATTACTATTCAATGGTAGGGAGCGTCGTGCCACGGGAATTAAAATTGAAATTGCAATTGGAAGATATAAAGGAATTGGATGTAAAAATAAGAAAACATTACTGTGGAGGCAAAGAAATTACTCAAGACATGTATCAAGAATTGGTGGATTTAGAAACAGATCGCCTTTTCGTGTATAACATCATTAGGTATGCGAGGTATCACAACCATCATAATTCAAAACCCGTGTTCTTATACAAGTTCACTGCCGAAACCGAACGAAATTATACTAAAAGGAATTACAACATGAATACAGTAAAAGGAGTCTGCCATTCTGATGATTTAATGTATTTTTTCAATGTCACTTGTCTCGACATACCTCTCACACAAGAATCTAAAGACATAATCGACAAATTGGTACGCTTGTGGGTCAATTTTGCAAAAACAGGTTGCCCTGTATCTGAGAGAGAAAGTGAACAATGGAGACCGTTCACAAATTCCGAAAAGAACACTTATATTATTGGGAATGATTTTAAATCCGTTCAAGATGAAGATGATGAAAACATTCGGTTTTGGGATGAAATTTACCACGAAAATATTTGA

Protein sequence (522 aa)

MSLTHVEQGTLEGVVCDNGKYVAFKGIPYAKPPLGKLRFKAPEPPEPWDGIRNANEHGPICPQYNERMNRIEDGSEDCLYLNVYSKNLKPTTPLPVMVWIHGGGFYTGSGNSEFYGPDFFMEHEVILVTLNYRLEVLGFLCLDNEEVPGNAGLKDQVAALKWIKQNIAAFGGDKNNITLFGCSAGSASTSLHLVSDMSKGLFDKAICQSGVCLNEWAYNLYARERAFQLGKLLGKETEDEIELLEFLRSIPASSLVNNELPYLQINNIDLVDNIKFGPVIENPNLNVEKFLNESPVNLVKKGHLANIPLILGYTSGEGIEIVRNLPRIVNYYSMVGSVVPRELKLKLQLEDIKELDVKIRKHYCGGKEITQDMYQELVDLETDRLFVYNIIRYARYHNHHNSKPVFLYKFTAETERNYTKRNYNMNTVKGVCHSDDLMYFFNVTCLDIPLTQESKDIIDKLVRLWVNFAKTGCPVSERESEQWRPFTNSEKNTYIIGNDFKSVQDEDDENIRFWDEIYHENI

Corresponding sequences in KAIKObase version 1

BMgn010328

Domains and motifs

DatabaseIDDescriptionStartEndEvalueInterPro ID
Gene3D3.40.50.1820- 25211.1e-161 IPR029058
CDDcd00312Esterase_lipase 54971.2e-158 -
PfamPF00135Carboxylesterase family 55138.0e-136 IPR002018
SUPERFAMILYSSF53474- 55204.2e-131 IPR029058
PANTHERPTHR43142- 75204.7e-151 -
PANTHERPTHR43142:SF1- 75204.7e-151 -
ProSitePatternsPS00122Carboxylesterases type-B serine active site. 170185- IPR019826

InterPro assignment

InterPro IDInterPro description
IPR002018Carboxylesterase, type B
IPR019826Carboxylesterase type B, active site
IPR029058Alpha/Beta hydrolase fold

Gene ontology (GO) assignment

No GO ID

SpeciesAccession
Danaus plexippusDPOGS208493
Heliconius melpomeneHMEL034846g1.t1
Manduca sextaXP_030027489.1
XP_030027491.1
Plutella xylostellag12144.t1
Spodoptera frugiperda (corn)GSSPFG00015417001.3-PA
Spodoptera frugiperda (rice)SFRICE017663.2-PA
Acyrthosiphon pisum -
Aedes aegypti -
Anopheles gambiae -
Apis mellifera -
Drosophila melanogaster -
Tribolium castaneum -
Homo sapiensNP_001177130.1
NP_001177131.1
NP_001305435.1
NP_001351711.1
NP_776176.5
XP_011521323.1
XP_011521325.1
XP_011521326.1
XP_011521327.1
XP_011521328.1
XP_011521329.1
XP_011521330.1
XP_011521331.1
XP_011521332.1
XP_016878649.1
XP_016878650.1
XP_016878651.1
XP_016878652.1
XP_016878653.1
XP_016878654.1
XP_016878655.1
XP_016878657.1
XP_024306002.1
XP_024306003.1
Mus musculusNP_666325.2

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value (transcripts per million (TPM))
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO07385:

Expression data of alternative splicing isoform(s) of KWMTBOMO07385:

MSTRG.4009.1 (position: Chr12:11673342..11683988)

MSTRG.4009.3 (position: Chr12:11675940..11680118)

MSTRG.4009.4 (position: Chr12:11675940..11684017)

MSTRG.4009.5 (position: Chr12:11675940..11684017)

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value with log10 conversion (value of transcripts per million (TPM) plus 1 is used to avoid negative output)
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO07385:

Expression data of alternative splicing isoform(s) of KWMTBOMO07385:

MSTRG.4009.1 (position: Chr12:11673342..11683988)

MSTRG.4009.3 (position: Chr12:11675940..11680118)

MSTRG.4009.4 (position: Chr12:11675940..11684017)

MSTRG.4009.5 (position: Chr12:11675940..11684017)