Position
| Chromosome | chr26 |
| Start | 732012 |
| End | 771248 |
| Strand | - |
view in Gbrowse: chr26:732012..771248
Most similar sequence in NCBI nr database
| Accession | Description | E-value | Score |
|---|---|---|---|
| XP_028028192.1 | ABC transporter G family member 23 isoform X2 | 0.0 | 1577 |
ORF sequence (2352 bp)
ATGAATAGTAACAGAGAGACCAGGCCCCTAGTCCCCGGCGGCTCCGCTATTCTTGTCTTCGAGACATCGCCTCCGTCGCCCATCGGCGATGCGAAGGAGTCCAAAATAGGCCAGATACAATTCTCAGTACCGATCGACAAACAGGAAAGCACGATATGGCAAAAGAGACAGCAAGCAGTCTGCGTGCGGCATGCCTTCAAACACTACGGGTCTAACAAACGGCCCAACCACGTCCTCAGCAACCTCAACATGACCGTCGCTAAAGGCACCATATACGGTCTACTTGGTGCGTCGGGCTGTGGGAAGACCACGCTTCTGTCTTGCATCGTGGGCAGACGGAAATTAAACAGCGGCGAGATATGGGTGCTCGGAGGGAAGCCTGGAACAAAAGGGTCTGGTGTCCCCGGGAAACGCGTCGGCTACATGCCTCAGGAGATAGCTCTGTACGGAGAGTTCACCATCAAGGAGACCATGATGTATTTCGGCTGGATCTTCGGCATGGAGACGAAGGAGATCGTGGATCGTCTTCGGTTCCTGCTAGACTTTCTGGACCTGCCCAGCGAGAACCGAATGGTCAAGAACTTGAGTGGAGGGCAGCAGAGAAGAGTCTCGTTCGCTGTAGCGCTGATGCACGACCCCGAACTCCTGATCTTGGACGAGCCGACGGTCGGAGTGGATCCACTGCTGAGGCAGTCGATCTGGACCCATTTGGTTCGGATCACCAGCTCCGGAGACAAGACCGTTATTATCACCACTCATTATATTGAGGAGGCCAGGCAGGCGCACTGCATTGGTCTGATGAGGAGCGGTCGTCTCCTCGCCGAGGAGTCCCCACAGGCCTTACTTAGAATGTACAGCTGCATATCGTTGGAAGATGTCTTCCTAAAACTATCCAGAAAACAGGGTCAATCGAATCAAGTAGTGGAACTAAACGTGACCGGCGGAGGAGCCCTCGGTCTGAACAAGATGTGTAAGCGCGAGGAGGCGCCCTACGCGGCCGAGGACGGGCAGGTCGTGGGCCTGAACTTCCACCAGTCCAAGGAGGTGCTCATTGTAGACCACGGAGCTGGGTCTAACGGAGACATTCCCGGTAAAGTCACGGAGGTCGTGGCCGCGGAGTGCGAAGACTGCGGGAATTGTTTCAATCTGACGTCGAGAGGGAAGATAAAAGCGTTGATCCAGAAGAACTTCCTGCGCATGTGGAGGAACATCGGCGTGATGCTGTTCATCTTCGTTCTCCCAGTGATGCAAGTCATTCTCTTCTGTCTGGCCATCGGAAGGGATCCGACAGGACTACGGATCGCCGTAGTCAACGAAGACGTGAGGATAATAGACGGCGACTGTCCCTACAACCACACCTGCTCAATGAAGAACCTCTCCTGCCGATACCTGGACAACCTGAGCGACCACATGATAAAGGAGTACTACGCTGATCTGTCGTCAGCGCTGGATGCCGTCCGTCAGGGTGAAGCCTGGGGCGCTCTGTACTTCAATGAGAATTATACGGATTCTTTGGTCGCCAGATTGGCTCTGGCTGACACGGCCGACGAAGAGACGGTGACATCGTCCGAGGTTCAAGTCTGGCTAGACATGTCCAACCAGCAGATCGGACTTATGCTCAACCGGGACATACAGTTCTCGTACAGGGACTTCGCTAAGGGTCTGCTTGAGACGTGCGACTACAACCCGAAGCTGGGCGACATCCCGATCGACTTCATGGACCCCATATACGGGAATAAGAACCCTTCGTTCACAGACTTCGTAGCTCCCGGCGTCATATTAACCATCGTATTCTTCCTCGCCGTGGCCCTGACATCGTCAGCGTTGATCGTGGAACGGATGGAGGGCCTCCTGGACCGATCCTGGGTGGCAGGGGTGTCTCCCGGAGAGATTCTGTTCTCGCACGTCGTCACCCAGTTCGTGGTGATGTGCGGGCAGACGGCGCTGGTGCTCATCTTCATGATATCGGTGTTCGGCGTCAAGAATAATGGGAACATCGTCTTCGTTATCATGCTGACTTTGCTGCAAGGTCTGTGCGGCATGTGCTTCGGGTTCGTGATATCGGCCGCTTGCGAGCTAGAGCGGAACGCGATCCAGCTGGCCTTGGGTTCGTTCTACCCCACGCTGCTGCTGAGCGGGGTGATCTGGCCCATCGAAGGGATGCCCTGGATCCTGCGCTACGTGTCCCTCTGCCTGCCCCTCACCCTCGCCACGAACTCGCTGCGGTCCATCCTGACGCGGGGCTGGCCCTTCACGGACTCGGACGTGTACATGGGCTTCGTGTCGACGTTGGCCTGGATCGCGCTCTTCCTCATCGTAACCCTCACGATCCTGAAATTCAAACGGAATTAA
Protein sequence (783 aa)
MNSNRETRPLVPGGSAILVFETSPPSPIGDAKESKIGQIQFSVPIDKQESTIWQKRQQAVCVRHAFKHYGSNKRPNHVLSNLNMTVAKGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGEFTIKETMMYFGWIFGMETKEIVDRLRFLLDFLDLPSENRMVKNLSGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWTHLVRITSSGDKTVIITTHYIEEARQAHCIGLMRSGRLLAEESPQALLRMYSCISLEDVFLKLSRKQGQSNQVVELNVTGGGALGLNKMCKREEAPYAAEDGQVVGLNFHQSKEVLIVDHGAGSNGDIPGKVTEVVAAECEDCGNCFNLTSRGKIKALIQKNFLRMWRNIGVMLFIFVLPVMQVILFCLAIGRDPTGLRIAVVNEDVRIIDGDCPYNHTCSMKNLSCRYLDNLSDHMIKEYYADLSSALDAVRQGEAWGALYFNENYTDSLVARLALADTADEETVTSSEVQVWLDMSNQQIGLMLNRDIQFSYRDFAKGLLETCDYNPKLGDIPIDFMDPIYGNKNPSFTDFVAPGVILTIVFFLAVALTSSALIVERMEGLLDRSWVAGVSPGEILFSHVVTQFVVMCGQTALVLIFMISVFGVKNNGNIVFVIMLTLLQGLCGMCFGFVISAACELERNAIQLALGSFYPTLLLSGVIWPIEGMPWILRYVSLCLPLTLATNSLRSILTRGWPFTDSDVYMGFVSTLAWIALFLIVTLTILKFKRN
Domains and motifs
| Database | ID | Description | Start | End | Evalue | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | PTHR43038 | - | 47 | 782 | 3.7e-301 | - |
| PANTHER | PTHR43038:SF5 | - | 47 | 782 | 3.7e-301 | - |
| Gene3D | 3.40.50.300 | - | 55 | 312 | 5.2e-57 | - |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 60 | 294 | 19.641 | IPR003439 |
| CDD | cd03230 | ABC_DR_subfamily_A | 62 | 272 | 1.1e-58 | - |
| SUPERFAMILY | SSF52540 | - | 62 | 282 | 4.8e-53 | IPR027417 |
| Pfam | PF00005 | ABC transporter | 79 | 222 | 3.6e-28 | IPR003439 |
| SMART | SM00382 | - | 88 | 278 | 4.0e-09 | IPR003593 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 195 | 209 | - | IPR017871 |
| Pfam | PF01061 | ABC-2 type transporter | 534 | 745 | 2.2e-41 | IPR013525 |
| ProSiteProfiles | PS51012 | ABC transporter integral membrane type-2 domain profile. | 554 | 781 | 17.818 | IPR000412 |
InterPro assignment
| InterPro ID | InterPro description |
|---|---|
| IPR000412 | ABC-2 transporter |
| IPR003439 | ABC transporter-like |
| IPR003593 | AAA+ ATPase domain |
| IPR013525 | ABC-2 type transporter |
| IPR017871 | ABC transporter, conserved site |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Gene ontology (GO) assignment
| GO category | GO ID | GO description |
|---|---|---|
| molecular function | GO:0005524 | ATP binding |
| cellular component | GO:0016020 | membrane |
| cellular component | GO:0016021 | integral component of membrane |
| molecular function | GO:0016887 | ATPase activity |
| cellular component | GO:0043190 | ATP-binding cassette (ABC) transporter complex |
| biological process | GO:0055085 | transmembrane transport |
| Species | Accession |
|---|---|
| Danaus plexippus | DPOGS201713 |
| Heliconius melpomene | HMEL016876g1.t1 |
| Manduca sexta | XP_030031733.1 |
| Plutella xylostella | g35887.t2 |
| Spodoptera frugiperda (corn) | GSSPFG00010452001-PA |
| Spodoptera frugiperda (rice) | SFRICE020807-PA |
| Acyrthosiphon pisum | XP_003246532.1 XP_029344264.1 |
| Aedes aegypti | AAEL018334-PB AAEL018334-PD |
| Anopheles gambiae | AGAP003680-PA |
| Apis mellifera | XP_006563475.1 XP_006563476.1 XP_006563477.1 XP_016772050.1 |
| Drosophila melanogaster | FBpp0307763 |
| Tribolium castaneum | XP_015839275.1 |
| Homo sapiens | - |
| Mus musculus | - |