KWMTBOMO12911

Position

Chromosome	Chr22
Start	4028822
End	4050166
Strand	+

view in Gbrowse: Chr22:4028822..4050166

Most similar sequence in NCBI nr database

Accession	Description	E-value	Score
XP_012550828.1	ATP-binding cassette sub-family G member 8	0.0	1891

ORF sequence (2742 bp)

ATGTCGCAGTCCGCGCTGGGGTTGGGCGGAGAGCGGCGTTACTCGGTGCCTTCAAATCCAATGATGCACGACCCTAGAGGGATGCATTCCGAAGATCTGCACGCGTGGTCTATCTATAGGCAAAACTTGAACTCAGACTTCACAGACAGCGCTTTAGGAAGCACAGACAAAAGTCCATTGCCGTATGGAAATTTTCAGCTGAGGGATACTACCGTGCAGTCAATACTATCCCATCCTCGCTATGGACCTAAATCAGCTCTCGGTTCGAACATGTACACGTATCTCAAATTTGGGCTACCACGAGTGTTTCCGCCGAATCACAACGGCTCGCAAAGATCTGGCACACCAAAGCCGAAAACTTCGATAGGCAGCGGCATGAAACCGGTACAAAGAATACACCGACAGAGCAGAGGAGTTCGGGAAACGTCTTCAGGTTATGACAGCTCCGACAACGAAACCACAGCTAACTACAACAAATACAGCCGGAAGTATCGATCGGATCCTGACTTTCGGATGCAAAACCTTCAGTCTACTTATCAGGCGAGTACTGGCGTGCCACTGGTAGCAATGCACCAGGCGGGTATCCGGGAGCCGCAGTGGGCCAACTCCCGGCACAAGTCTGTCAGCGAAGCCAACTTACTGGGCATAGACGGACGACCGCAACGGACCCAATACACAAACAGAAGAAACAGTGTTGCCGATTTCGTTCCGGACGGAGATCATCACAGTTATCTGCTGCCGTCTTCGCACCTCGGTGGAAGGATGTCGAAGGCCGGTAGTCACATGTCGGTAGCGCACTCCAGGAAGCACTCTACACTGAGGCCCGGAGATCAACTCGACGGATATGCACATTCAGCTTACATTTACCCGAATTATTACGTGAACAGTTTAGAAATAACGTCACCGGAAAACAAATCAACGCTCGTGGTGTCAGGGTTGAGTTTCGAAGTGAAGTGTGGCGAGATTCTCGCAGTGCTGGCGACCGCTCAGCATGAGGCGACGGGACTATTGGACGTTCTAGCTGGAGTTCGGAAGAAACTATCCGGCGATATAGTGATCAATGGGCAGCCTGTAGCTTCGTCTACGCTTAGGAAAGTGGTAGCATACGTGAGGAATGACACCGCGCTGTGCCCCACCATGTCAGTGGAGCACACGTTGAGGTTTCATGCCGCATTGAGAAAGCCCAGGAACACGCATAGTCACGTTAAAATGGGTGACCGTGATCGGATAAATCTTCTGATAGAAGAGCTTGGTTTAGAACAAGTCAGGGACACGAACGTTGGGCGATTGACTCGCTCGGAGATCCGTAGACTGAATGTTGCGTGTCAACTACTTTTGGACATGGCTATCCTTATCTTAGACCAGCCTACGAAAGAGATGGACATATTTGACACGTTCTTCTTGGTGGAGTATCTTCGGAACTGGGCCAGCACCGGTCGTGTCGTGATCATGTCGTTACATCCACCTACGTATGAGATTTTTGCCATGTTGACTAAAGTTGTATTAATATCAGCAGGTCGAACAATGTTCAGCGGTTACAGACGGGATATGTTGCCATATTTCTCATCCATCGATTATCCCTGCCCTGCCTTCAAGAACCCATCGGACTATTATTTGGACCTGGTGACCCTGGATGAGTTGTCAGCGGCGGCGCTACTCGAGTCCTCGGGCCGCATCGAGGCGCTGAGCGCTGCCCGGCCCGCCACTCGCGCCGCCCCGCCCCCCGCCGCGCCCCTCCCGGCGCCCCGACACCCGCCCGCGCCGCACGTGCAGATACTCGCACTACTGCAAAAAACTTTAGTATTCACTCAAGTTTCGACATTATCGAATATCATCACGCGAGTCCTCATAGCTGCTATTATATCTATTATCACCGGAACCATCTTCTGGGACCTGCCATCCACCGACCCTAAGTTAACACAGAACGACAGAATAGGATTTCACTACACGGTGATGTGTTTGTCTGCTTGGCCGGTGTTGCTGTGGCTCGGCGCCAGGGAGGCCAGTTCGATGAGGAAGCACGTCGAGAGAGATATCGCTGTAGGACTTTACTCCAGGACCGTGTTTATATTATACGATCAATTTATCGAAGTACTTTCAGCGATATTGACCTGGCTAGCATACTTGGTCCCAAGCTATGCCATGTCGGGACTGTATGCACCCACACCAGGTGCCTTCGACGCCTTCTATATCTATTTAGGATGCATGGTGTTATTTTTCATCAACATCCAAATGGTGTGTCGAGCAACGATATTCCTGGTTCCGATGGAGAAGACGGCCTCAGTGATAGCTGGCGTATGTCTCCTGCTCGGCACCTTGGTGAACGGCGTGATGATACAGCAAGCGGATCTGCCTTATTACGTTAAATGGCTGCAATACGTGTCTCCGTCGAGGTGGACGATACCGGAGATATTGAGGAGGGAACTAAGCGAAACGGTTTTGAGGAACAGCATCAGTAAAGATCTCAGATGTACCAATAAACAGAGGCCGTATCCCGATATAATAGTACAATCGCCGTGTCCGCCGCCGAATGGAACTCAGGTGCTCTCCAACTACGGGTACCTTCGCGCGGACAACCTCTGGGAGCAAACGGACGACAGATTCCTGATCGCGCTGACCGTATTCTACGCGGTGTTCTCGCTGATTGCGATAATCGCTTTTGTCGCCGACTGCCCCAGTTATAGGAGAAGCAAAGAACGGAACAGTATGAAAGGACACAAGGTAACAGTTAACACTCCATGA

Protein sequence (913 aa)

MSQSALGLGGERRYSVPSNPMMHDPRGMHSEDLHAWSIYRQNLNSDFTDSALGSTDKSPLPYGNFQLRDTTVQSILSHPRYGPKSALGSNMYTYLKFGLPRVFPPNHNGSQRSGTPKPKTSIGSGMKPVQRIHRQSRGVRETSSGYDSSDNETTANYNKYSRKYRSDPDFRMQNLQSTYQASTGVPLVAMHQAGIREPQWANSRHKSVSEANLLGIDGRPQRTQYTNRRNSVADFVPDGDHHSYLLPSSHLGGRMSKAGSHMSVAHSRKHSTLRPGDQLDGYAHSAYIYPNYYVNSLEITSPENKSTLVVSGLSFEVKCGEILAVLATAQHEATGLLDVLAGVRKKLSGDIVINGQPVASSTLRKVVAYVRNDTALCPTMSVEHTLRFHAALRKPRNTHSHVKMGDRDRINLLIEELGLEQVRDTNVGRLTRSEIRRLNVACQLLLDMAILILDQPTKEMDIFDTFFLVEYLRNWASTGRVVIMSLHPPTYEIFAMLTKVVLISAGRTMFSGYRRDMLPYFSSIDYPCPAFKNPSDYYLDLVTLDELSAAALLESSGRIEALSAARPATRAAPPPAAPLPAPRHPPAPHVQILALLQKTLVFTQVSTLSNIITRVLIAAIISIITGTIFWDLPSTDPKLTQNDRIGFHYTVMCLSAWPVLLWLGAREASSMRKHVERDIAVGLYSRTVFILYDQFIEVLSAILTWLAYLVPSYAMSGLYAPTPGAFDAFYIYLGCMVLFFINIQMVCRATIFLVPMEKTASVIAGVCLLLGTLVNGVMIQQADLPYYVKWLQYVSPSRWTIPEILRRELSETVLRNSISKDLRCTNKQRPYPDIIVQSPCPPPNGTQVLSNYGYLRADNLWEQTDDRFLIALTVFYAVFSLIAIIAFVADCPSYRRSKERNSMKGHKVTVNTP

Corresponding sequences in KAIKObase version 1

BMgn000220

Domains and motifs

Database	ID	Description	Start	End	Evalue	InterPro ID
PANTHER	PTHR19241	-	25	885	0.0	-
PANTHER	PTHR19241:SF539	-	25	885	0.0	-
ProSiteProfiles	PS50893	ATP-binding cassette, ABC transporter-type domain profile.	294	530	12.745	IPR003439
Gene3D	3.40.50.300	-	295	523	2.8e-31	-
SUPERFAMILY	SSF52540	-	306	528	3.5e-27	IPR027417
Pfam	PF00005	ABC transporter	312	457	1.4e-09	IPR003439
Pfam	PF01061	ABC-2 type transporter	591	801	3.0e-17	IPR013525

InterPro assignment

InterPro ID	InterPro description
IPR003439	ABC transporter-like
IPR013525	ABC-2 type transporter
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Gene ontology (GO) assignment

GO category	GO ID	GO description
molecular function	GO:0005524	ATP binding
cellular component	GO:0016020	membrane
molecular function	GO:0016887	ATPase activity

Species	Accession
Danaus plexippus	DPOGS210111
Heliconius melpomene	HMEL031807g1.t1
Manduca sexta	XP_030037228.1
Plutella xylostella	g32872.t1
Spodoptera frugiperda (corn)	GSSPFG00021845001-PA GSSPFG00023688001-PA GSSPFG00024146001-PA
Spodoptera frugiperda (rice)	SFRICE015890-PA
Acyrthosiphon pisum	XP_001944045.2
Aedes aegypti	AAEL022734-PA AAEL022734-PB AAEL022734-PC AAEL022734-PD AAEL022734-PE
Anopheles gambiae	AGAP002050-PA
Apis mellifera	XP_397283.1
Drosophila melanogaster	FBpp0084098 FBpp0084099
Tribolium castaneum	XP_968472.1
Homo sapiens	-
Mus musculus	-

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value (transcripts per million (TPM))
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO12911:

Expression data of alternative splicing isoform(s) of KWMTBOMO12911:

MSTRG.11671.1 (position: Chr22:3980066..4051649)

MSTRG.11671.2 (position: Chr22:3980066..4049556)

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value with log₁₀ conversion (value of transcripts per million (TPM) plus 1 is used to avoid negative output)
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO12911:

Expression data of alternative splicing isoform(s) of KWMTBOMO12911:

MSTRG.11671.1 (position: Chr22:3980066..4051649)

MSTRG.11671.2 (position: Chr22:3980066..4049556)