Position
| Chromosome | chr22 |
| Start | 3699868 |
| End | 3731868 |
| Strand | - |
view in Gbrowse: chr22:3699868..3731868
Most similar sequence in NCBI nr database
| Accession | Description | E-value | Score |
|---|
| XP_012544645.1 | ATP-binding cassette sub-family D member 3 | 0.0 | 1388 |
ORF sequence (2004 bp)
ATGGCACCGAATTTAAGTAAATTAACGCAACGGACAGACGTTAAAGTCGGTATTGCTGTCTCCGCAGCTCTTGGTGCTTGGATTATCCGGAACTCCTTTAAGTCAAGAAAATCAAGATATGACAAACCCGGCCGTCTTTCACCCGAAGAGCAGATTCAGTACATGATCAAAGAAAAAGACAAAAAGGGGCCAAAAGCACAAGTTGATGCTAGATTTTTAGCAGAATTTAAAACACTATGGAAGATTATGATGCCAGGCTGGTGGACCAAAGAAAGTGCCTTCATGTCGTTGATAGCCATCTCTCTAATATCCAGATCCATGTGTGATCTGTGGCTAATACAGCAGACTACTTTGATTGAAGGGTCAATTATCACAATGAACCACAAGGAGTTCAAGAGGCTGTTAATCCAGTTCTTCGGATCAATGCCACTGATTTCACTGGTGAACAACGTCTTGAAGTGGAGCATAGGTGAACTAAAGTTGAGGATAAGGACCAATTTATCATTGCACCTTTACAATGAATATATGAAAGGCTTCACATACTACCAAGTGACGAACTTAGACAATCGGATATCGAACGCTGATCAGCTCTTGACAACTGACATTGACAGGTTCTGTGAAACCGTCGTCGATCTATACAGCAACATCAGCAAACCGCTCCTGGATATCGCAATATACTTGTACAGGCTCACTGTGAACTTGGGTGCATCTACGCCCGGAATTATGGTGGCCTACCTCCTGGTATCGGGGGTGTTGCTAACACACTTGCGGAAACCAACAGCAAAAATGACAGTTCAAGAACAGAAACTCGAAGGTGAATATAGATACGTCAACTCCAGACTTATCACGAATTCAGAAGAAATTGCTTTCTATCAGGGTAATCACAGAGAGCGCTTAACAGTACTGGCCAGTTTCTACAAGCTGACGAGACATTTGAGAAACTTCTTAAACTTCAGAGTGTGCATGGGCTTTCTCGACAACATCATTGCTAAATACATCGCCATCACAGTAGGTTTCTATGCTGTGTCTAGGCCGTTCTTCGTCAAGGACCACAACTTATTGACTACGAGTACAGAAAACGATAGGTTTAAGCACTACTACACGTACGGTCGGATGTTGGTTAAGATGGCCGAGGGGATCGGGCGGATCGTGTTGTCTGGTCGCGAGCTGAGCAAGCTGGCCGGCCTCACGTCCCGGGTCACGCAGCTGCGCGTCGTGTTGGACGACATCAACAAGGGCAACTACTCGAGGACCATGGTCGACAAAACGTCACATAGTGCCAACGGCCCGCCCAGGCTGTTGGCTCCGGGTGCCGGTCGGATTATATACCAGGATAAGATCATAAAGTTCGATAAAGTACCGCTCGTCACTCCTAACGGTGATATCCTCATTGATGAGCTGTCCTTCGAAGTAAAGTCCGGTATCAACGTGCTGGTGTGCGGACCGAACGGCTGCGGCAAGTCGTCCATGTTCCGCCAGCTGGGCGAGCTGTGGCCGATATTCGGCGGCACCCTCACCAAACCCCCCAAGGGGAAGCTCTTCTACGTCCCTCAACGACCGTACATGACTCTGGGGACCTTGAGAGACCAGGTGATATACCCGCAAACGCGCGAGGAGATGGTGCGGCGCGGGCGCTCCGACGAGCAGCTGGGCCGCTTCCTGCGCATCGTGCAGCTGGAGTACCTGGCGGCGCGCGACGGCGGCTGGGACGCCGTGGAGGACTGGATGGACGTGCTCTCCGGCGGCGAGAAGCAGAGAATCGCCATGGCGCGTCTGTTCTACCACGAGCCGCAGTTCGCCATACTGGACGAGTGCACCAGCGCCGTGTCCGTGGACGTCGAGGGACAGATGTACCAGTACTGCAGAGAGATGGGCATATCGTTGTTCACCGTCTCGCACCGCAAGTCGCTGTGGAAGCACCACGACCACTACCTACAGATGGACGGCCGCGGCGGATACGTCTTCGAAGAGATCGACGCCGAGACGCAAGAGTTCGGATCGTGA
Protein sequence (667 aa)
MAPNLSKLTQRTDVKVGIAVSAALGAWIIRNSFKSRKSRYDKPGRLSPEEQIQYMIKEKDKKGPKAQVDARFLAEFKTLWKIMMPGWWTKESAFMSLIAISLISRSMCDLWLIQQTTLIEGSIITMNHKEFKRLLIQFFGSMPLISLVNNVLKWSIGELKLRIRTNLSLHLYNEYMKGFTYYQVTNLDNRISNADQLLTTDIDRFCETVVDLYSNISKPLLDIAIYLYRLTVNLGASTPGIMVAYLLVSGVLLTHLRKPTAKMTVQEQKLEGEYRYVNSRLITNSEEIAFYQGNHRERLTVLASFYKLTRHLRNFLNFRVCMGFLDNIIAKYIAITVGFYAVSRPFFVKDHNLLTTSTENDRFKHYYTYGRMLVKMAEGIGRIVLSGRELSKLAGLTSRVTQLRVVLDDINKGNYSRTMVDKTSHSANGPPRLLAPGAGRIIYQDKIIKFDKVPLVTPNGDILIDELSFEVKSGINVLVCGPNGCGKSSMFRQLGELWPIFGGTLTKPPKGKLFYVPQRPYMTLGTLRDQVIYPQTREEMVRRGRSDEQLGRFLRIVQLEYLAARDGGWDAVEDWMDVLSGGEKQRIAMARLFYHEPQFAILDECTSAVSVDVEGQMYQYCREMGISLFTVSHRKSLWKHHDHYLQMDGRGGYVFEEIDAETQEFGS
Domains and motifs
| Database | ID | Description | Start | End | Evalue | InterPro ID |
|---|
| PANTHER | PTHR11384 | - |
28 | 667 | 0.0 |
- |
| PANTHER | PTHR11384:SF34 | - |
28 | 667 | 0.0 |
IPR031241 |
| SUPERFAMILY | SSF90123 | - |
71 | 342 | 4.6e-07 |
IPR036640 |
| Pfam | PF06472 | ABC transporter transmembrane region 2 |
79 | 347 | 5.2e-86 |
IPR011527 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. |
118 | 330 | 10.654 |
IPR011527 |
| Gene3D | 3.40.50.300 | - |
443 | 664 | 5.0e-37 |
- |
| SUPERFAMILY | SSF52540 | - |
443 | 649 | 1.1e-34 |
IPR027417 |
| CDD | cd03223 | ABCD_peroxisomal_ALDP |
448 | 653 | 2.1e-83 |
- |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. |
448 | 667 | 13.759 |
IPR003439 |
| Pfam | PF00005 | ABC transporter |
465 | 607 | 1.4e-14 |
IPR003439 |
| SMART | SM00382 | - |
473 | 661 | 1.3e-04 |
IPR003593 |
| ProSitePatterns | PS00211 | ABC transporters family signature. |
579 | 593 | - |
IPR017871 |
InterPro assignment
| InterPro ID | InterPro description |
|---|
| IPR003439 | ABC transporter-like |
| IPR003593 | AAA+ ATPase domain |
| IPR011527 | ABC transporter type 1, transmembrane domain |
| IPR017871 | ABC transporter, conserved site |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR031241 | ATP-binding cassette sub-family D member 3 |
| IPR036640 | ABC transporter type 1, transmembrane domain superfamily |
Gene ontology (GO) assignment
| GO category | GO ID | GO description |
|---|
| molecular function | GO:0005524 | ATP binding |
| cellular component | GO:0005777 | peroxisome |
| biological process | GO:0015910 | long-chain fatty acid import into peroxisome |
| cellular component | GO:0016021 | integral component of membrane |
| molecular function | GO:0016887 | ATPase activity |
| molecular function | GO:0042626 | ATPase-coupled transmembrane transporter activity |
| molecular function | GO:0042803 | protein homodimerization activity |
| biological process | GO:0055085 | transmembrane transport |