KWMTBOMO09024

Position

ChromosomeChr15
Start9884645
End9916355
Strand-

view in Gbrowse: Chr15:9884645..9916355

Most similar sequence in NCBI nr database

AccessionDescriptionE-valueScore
XP_004927667.2probable multidrug resistance-associated protein lethal(2)036590.02654

ORF sequence (3882 bp)

ATGATAATATTGAGTAAGGCTCAGCCAATATTTCTTGGTTGGCTGGTGGAATATTACAGCCCCGACAGTAAAATGACGCCCTCGGACGCATATCTCTGCGCTGCGGCAGTCGTAGTATGCTCAGCTCTTAATGTATTCGTCATGCATCCATATATGATGGCCATATTACACATGGGAATGAAGTTCAGGGTCGCTTGCTGCTCGCTCATCTACAGAAAGTCTCTGCGATTATCCAAGACCGCTCTCGGCGAGACGACAATCGGTCAAGTCGTCAACCTGTTGTCGAACGATGTGAATCGTTTCGACGTCGCGGTGATATTCATCCACTATCTATGGATCGGGCCGCTGGTCACCGTGATCATCACATACTTTATGTGGCTGGAGATCAACTGGGCCGCGGTGGTCGGAGTAGCTTTCATGCTGGCATTCATACCGCTGCAAGCTTACTTGGGAAAGAAGACTTCGGTTTTGAGACTAAAAACGGCATTAAGGACCGACGAACGTGTCCGACTTATGAATGAAATTCTATCCGGTATTCAAGTCATCAAGATGTACACTTGGGAGAAACCTTTCGCTGACCTCGTCGCCAAAGCTAGGAAACACGAAATAAAACAAATCCGAGCGACGTCTTATATCCGAGGAGTGCTCACTTCGTTCATAATGTTCACGACGCGCAGTTGCTTATTCTGTTCGATACTGGCGTACGTGCTGGTGAACAATGTGATCACCGCCAAACAAGTGTTCGTTATAACGAGCTTCTACAGTATATTGAGGCAGTCCATGACCGTGTTCTTTCCGCAAGGTATTGCTCAAGTAGCTGAAGCTTTGATATCCATAAAACGGCTTCAGAGCTTCATGTTATACGAAGACACAAACAAACCCGTTCCCGGACTGGCCGAGATACAAACCTCAACGAAACCCAAGGAGGTGACAAAGGATTCTCTGTTGCCCGCCAGCGATGAGTTGGATGTGAAAAAGGATGATTCGAAATTGACAGCCACCGGTGATAGTTCCACAGAAACCAAAGAAGCCAAGGGTAATGGAAACGTGAACTTAGCCCCCATAGAGGCGAGCGAAGAGGACGAACAAGAACTATCGGCTCGCGTCGAAGAGGACTCCCGCGGCGTGAGACTCAAGCACGCCACCGCCAAATGGATACAGTCTCATCCGGAAAACACTCTCACCGATCTTTCTCTCACCATAAAACCGGGGAAGTTAATAGCAGTAATAGGCCCAGTCGGAGCGGGCAAGTCGTCCCTGTTGCACGTGTTGCTACGGGAGTTGCCGCTCGCGTCGGGAAGCGTCCACGTCGGCGGAACCGTGTCCTACGCGAGCCAGGAGCCTTGGCTCTTTGCGGGGAGCGTCCGTCAGAATATATTGTTCGGTCAGCCGATGGATCGTCCCCGGTACAACACGGTGGTGCGGCGGTGCGCGCTCGACCGCGACTTCGCGCTTTTCCCGCACGGAGACAAGACCGTCGTCGGCGAACGTGGCGTCAGTCTCAGTGGAGGTCAACGCGCCCGTATATCTCTGGCTCGCGCGGTGTACAAGCGCGCCGACATATACTTGCTGGACGACCCGCTGTCCGCCGTCGACGCGCACGTCGGTCGGCACTTGTTCGAGTCGTGCGTGGTCGGCTACCTGCGGAACTCAACGCGGATACTCGTCACGCATCAGCTGCAGTTCCTCAGGGACGTCGATCAGATAATAATATTGAAAAATGGCACAATAGCGGCGGCCGGTAACTTCGATACTTTGAGCGCGTCTGGTCTTGATTTTGCGACATTGTTGGCTCGGGATCAGCACGAGGAAGAGAAACCGACCGAGGCCGCGGTCCTCACCGACACCGAGGATAATAACTCGGTTCTCCACGGAAGCTTTAGGAAACGACAACTGAGTATTCATTCCGTGAGCTCGGTGGACAACCTGACGGCGACGGCGCCCCCGGAAGGCACCCGCGAGGAGGCGGAGATGAAGTCTGCGGGCGCGGTGTCGGGGCGCGTGTACGGCGCCTACCTGCGAGCCTGCGGTAACGCATTCGTGATCACATTGATGCTGCTTGTCGCCGTCTTGGCGCAACTACTCGGTTCTGCCTCCGATTGGTGGACCAGCTTCTGGGTAAAGTTAGAAGAGAAAAATTACGCATCTCATACGTTGCGCACTTTCGATGATCGAAATGAGACGGGAAGTTTACAAGCCGCGGACCCTAGAGTCGATAATGCGATCTTCTCTGACGTCGGCCTGTCTCGCTATGATTGCATTTATATTTACACTGGTATCGTAGCGGCTCTGGTAGCGGTCACGTTGCTGCGTTCGTTTATGTTCTTCTGGATAGCGATGCGCGCCTCGACCCGCCTGCACAACAACATGTTCGCGGCCATCACCCGCGCCCCCATGCGCTTCTTCCACGTCAACCCCTCGGGCCGGATCCTCAACCGCTTCTCCAAGGACATGGGCGCTGTCGATGAAGTGCTGCCCTCTGCCGTTATTGATGTCCTACAAATTGGTCTGTCGCTGATCGGTATCGTGGTCGTGGTGGCGATAGTGAACTACTGGCTTCTGGTGCCGACGGTGGCGATCGGCGTCATCTTCTACGGGCTCCGCATATTCTACCTGGCCACGTCGCGGAACATCAAACGCCTCGAGGGTGTGACTCGGAGTCCCGTGTTCTCGCACCTCAACGCTTCGTTGCAAGGTATCACCACTATCAGAGCGTTCGGCGCTCAAGAGGCTCTCATCAGGGAATTCGACAATCATCAGGATCTGCACAGCTCAGCTTGGTACATGTTCATCGCGAGCTCAAGAGCGTTCGGTTTCTGGCTGGACCTGGTGTGCGTTGTGTACATCGCGGTGGTCACTATGAGCTTCCTCGTGCTCGGCAATGAGAAGTACGGAGGGGACGTCGGCCTGGCCATAACGCAGGCGATGGGTCTGACCGGCATGTTCCAGTGGGGCATGCGGCAGTCCACTGAACTGGAGAACCAAATGACTAGTGTCGAGAGGATCGACGAATATTCGAACATAGAATCGGAGCCCCCGCTCCAGTCGGAGGGCGACAAGAAGCCTCCCCCCTCGTGGCCGGAGGCGGGCGGCGTGCAGTTCCGCCATGTACATCTGTACTACGCGCCCGGCGAGCCCGCCGTGCTCCGGGACTTGTCCTTCATCATCCTACCCAAAGAGAAGGTCGGCATCGTCGGCAGGACCGGCGCCGGGAAATCTTCTCTTATCAATGCTTTGTTCAGGCTTGCGACAATAGAAGGCGAGATCATAATCGATAATCGAGAGACTTCTTCGATGGGCCTGCATGAGCTCCGTAGTCAGATCTCGATAATTCCTCAAGAGCCAGTTCTGTTTTCGGGCACCATGAGACACAATCTGGATCCCTTCGATGAATATCCCGACCAAGTATTGTGGAGGGCCTTGGAAGAGGTTGAGCTGAAGGAAGTAGTGCAGGAGCTCCCGGCCGGTCTGAACTCTCGCATGTCGGAGGGCGGCGGGAACTTCTCCGTGGGGCAGCGGCAGCTCGTGTGCCTCGCGCGGGCCATCGTCAGGCGCAACCGCCTGCTCGTGCTGGACGAGGCCACCGCCAACGTCGACCCGCAAACCGATGCCCTCATACAAACGACAATTAGAAACAAATTCGCAGAATGCACAGTACTCACGATTGCTCACAGACTTCACACCGTCATGGATTCTGATAAGGTTCTCGTGATGGACGCTGGTCAAATGGTGGAGTTTGATCATCCGCACGTGCTGCTGCAGAAACACGAGGGCGTCCTGCGCGGCATGGTCGAGCAGACCGGCAAGGCCATGGCCGACACGCTTGCGCGGGTCGCGCAACAGGCTTACGAGAAAAAAAATTTAGGGAGTGCGACAGAATGA

Protein sequence (1293 aa)

MIILSKAQPIFLGWLVEYYSPDSKMTPSDAYLCAAAVVVCSALNVFVMHPYMMAILHMGMKFRVACCSLIYRKSLRLSKTALGETTIGQVVNLLSNDVNRFDVAVIFIHYLWIGPLVTVIITYFMWLEINWAAVVGVAFMLAFIPLQAYLGKKTSVLRLKTALRTDERVRLMNEILSGIQVIKMYTWEKPFADLVAKARKHEIKQIRATSYIRGVLTSFIMFTTRSCLFCSILAYVLVNNVITAKQVFVITSFYSILRQSMTVFFPQGIAQVAEALISIKRLQSFMLYEDTNKPVPGLAEIQTSTKPKEVTKDSLLPASDELDVKKDDSKLTATGDSSTETKEAKGNGNVNLAPIEASEEDEQELSARVEEDSRGVRLKHATAKWIQSHPENTLTDLSLTIKPGKLIAVIGPVGAGKSSLLHVLLRELPLASGSVHVGGTVSYASQEPWLFAGSVRQNILFGQPMDRPRYNTVVRRCALDRDFALFPHGDKTVVGERGVSLSGGQRARISLARAVYKRADIYLLDDPLSAVDAHVGRHLFESCVVGYLRNSTRILVTHQLQFLRDVDQIIILKNGTIAAAGNFDTLSASGLDFATLLARDQHEEEKPTEAAVLTDTEDNNSVLHGSFRKRQLSIHSVSSVDNLTATAPPEGTREEAEMKSAGAVSGRVYGAYLRACGNAFVITLMLLVAVLAQLLGSASDWWTSFWVKLEEKNYASHTLRTFDDRNETGSLQAADPRVDNAIFSDVGLSRYDCIYIYTGIVAALVAVTLLRSFMFFWIAMRASTRLHNNMFAAITRAPMRFFHVNPSGRILNRFSKDMGAVDEVLPSAVIDVLQIGLSLIGIVVVVAIVNYWLLVPTVAIGVIFYGLRIFYLATSRNIKRLEGVTRSPVFSHLNASLQGITTIRAFGAQEALIREFDNHQDLHSSAWYMFIASSRAFGFWLDLVCVVYIAVVTMSFLVLGNEKYGGDVGLAITQAMGLTGMFQWGMRQSTELENQMTSVERIDEYSNIESEPPLQSEGDKKPPPSWPEAGGVQFRHVHLYYAPGEPAVLRDLSFIILPKEKVGIVGRTGAGKSSLINALFRLATIEGEIIIDNRETSSMGLHELRSQISIIPQEPVLFSGTMRHNLDPFDEYPDQVLWRALEEVELKEVVQELPAGLNSRMSEGGGNFSVGQRQLVCLARAIVRRNRLLVLDEATANVDPQTDALIQTTIRNKFAECTVLTIAHRLHTVMDSDKVLVMDAGQMVEFDHPHVLLQKHEGVLRGMVEQTGKAMADTLARVAQQAYEKKNLGSATE

Corresponding sequences in KAIKObase version 1

BMgn007769BMgn010848BMgn010849

Domains and motifs

DatabaseIDDescriptionStartEndEvalueInterPro ID
Gene3D1.20.1560.10- 12901.5e-18 IPR036640
ProSiteProfilesPS50929ABC transporter integral membrane type-1 fused domain profile. 126730.168 IPR011527
PANTHERPTHR24223- 212830.0 -
PANTHERPTHR24223:SF360- 212830.0 -
SUPERFAMILYSSF90123- 32823.0e-32 IPR036640
PfamPF00664ABC transporter transmembrane region 52611.1e-31 IPR011527
CDDcd18593ABC_6TM_MRP4_D1_like 82821.8e-122 -
Gene3D3.40.50.300- 3486235.9e-77 -
CDDcd03250ABCC_MRP_domain1 3765763.1e-111 -
ProSiteProfilesPS50893ATP-binding cassette, ABC transporter-type domain profile. 37659922.396 IPR003439
SUPERFAMILYSSF52540- 3765971.5e-56 IPR027417
PfamPF00005ABC transporter 3945288.5e-21 IPR003439
SMARTSM00382- 4035763.4e-12 IPR003593
ProSitePatternsPS00211ABC transporters family signature. 501515- IPR017871
Gene3D1.20.1560.10- 67110131.5e-43 IPR036640
ProSiteProfilesPS50929ABC transporter integral membrane type-1 fused domain profile. 68499438.473 IPR011527
PfamPF00664ABC transporter transmembrane region 6869612.7e-37 IPR011527
CDDcd18601ABC_6TM_MRP4_D2_like 69910061.5e-115 -
SUPERFAMILYSSF90123- 74510111.2e-59 IPR036640
Gene3D3.40.50.300- 101512661.1e-84 -
SUPERFAMILYSSF52540- 102112564.6e-67 IPR027417
CDDcd03244ABCC_MRP_domain2 103012492.7e-128 -
ProSiteProfilesPS50893ATP-binding cassette, ABC transporter-type domain profile. 1032126516.1 IPR003439
PfamPF00005ABC transporter 104911962.0e-29 IPR003439
SMARTSM00382- 105812421.1e-10 IPR003593
ProSitePatternsPS00211ABC transporters family signature. 11681182- IPR017871

InterPro assignment

InterPro IDInterPro description
IPR003439ABC transporter-like
IPR003593AAA+ ATPase domain
IPR011527ABC transporter type 1, transmembrane domain
IPR017871ABC transporter, conserved site
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR036640ABC transporter type 1, transmembrane domain superfamily

Gene ontology (GO) assignment

GO categoryGO IDGO description
molecular functionGO:0005524ATP binding
cellular componentGO:0016021integral component of membrane
molecular functionGO:0016887ATPase activity
molecular functionGO:0042626ATPase-coupled transmembrane transporter activity
biological processGO:0055085transmembrane transport
SpeciesAccession
Danaus plexippusDPOGS203074
DPOGS208634
DPOGS208713
Heliconius melpomeneHMEL011731g1.t1
Manduca sextaXP_030034310.1
Plutella xylostellag13380.t2
Spodoptera frugiperda (corn)GSSPFG00024493001.2-PA
Spodoptera frugiperda (rice)SFRICE006492-PA
Acyrthosiphon pisumXP_029346478.1
Aedes aegyptiAAEL018267-PB
AAEL018267-PC
AAEL018267-PD
AAEL018267-PE
AAEL018267-PF
AAEL018267-PG
Anopheles gambiaeAGAP006427-PA
Apis melliferaXP_393750.5
Drosophila melanogasterFBpp0079228
FBpp0297935
Tribolium castaneumXP_015835266.1
Homo sapiensXP_005254082.1
XP_016875808.1
Mus musculusNP_001157147.1

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value (transcripts per million (TPM))
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO09024:

Expression data of alternative splicing isoform(s) of KWMTBOMO09024:

MSTRG.6284.1 (position: Chr15:9884380..9947512)

MSTRG.6284.2 (position: Chr15:9884408..9947534)

MSTRG.6284.3 (position: Chr15:9884408..9947534)

MSTRG.6284.4 (position: Chr15:9884500..9947512)

MSTRG.6284.5 (position: Chr15:9884500..9947423)

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value with log10 conversion (value of transcripts per million (TPM) plus 1 is used to avoid negative output)
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO09024:

Expression data of alternative splicing isoform(s) of KWMTBOMO09024:

MSTRG.6284.1 (position: Chr15:9884380..9947512)

MSTRG.6284.2 (position: Chr15:9884408..9947534)

MSTRG.6284.3 (position: Chr15:9884408..9947534)

MSTRG.6284.4 (position: Chr15:9884500..9947512)

MSTRG.6284.5 (position: Chr15:9884500..9947423)