KWMTBOMO08968

Position

ChromosomeChr15
Start8977053
End9010926
Strand+

view in Gbrowse: Chr15:8977053..9010926

Most similar sequence in NCBI nr database

AccessionDescriptionE-valueScore
XP_012547933.1multidrug resistance-associated protein 40.02804

ORF sequence (4095 bp)

ATGGGTGTTGGAAGTGAAAAAGTTGATGAGAAGAAAAAGAAAAAACAATTGCCTACGATGAAAGAGCCTCCCGGAGCGTTTTCTCGTTCGTTATTCTGTTGGATGTTTCCGTTGTTTTATAGAGGGAACTACAGGGATTTAGAAGAAGAAGACTTAGTTCCGCCTAAAAATCAATACAATTCGAAACTAGTCGGAGATCAGCTAGAAAGGGCATGGTTATTGGAGGAGCATAATGCACGAGCAGCCGGTAGAGACCCATCACTTATTAAAGTATTGTTCAAAACATTCGGATGGTCTTTTTTGCCTGGCGGTATTTTGCAATTCGGTTTTGCGATTTTACGTATTATAACACCTCTGTTATTTGGAGAGCTGCTCACGTATTGGACAGTGGATCCGCCTATTACGCAAATGGAAGCGGTATACTACGCACTCAGTATGATAATCATTAACTGGATTGCAGCCTATCTGAACCATCACGGCAATTTATTTTGCTCCCAATTCGGAATGAAACTTAGAATTGCTACAAGCTCTTTGATGTTCAGGAAGGTAATGCGCATGAACAATGGTGCTTTAGGAGACACGACGGCCGGGAAAGTAGTCAATATACTTTCAAACGACCTGCAAAGATACGACAATGCCTTTATATTCTTGCATTTCGTTTGGATCATACCCATACAGTTGGTTGCTGTCTGCTATCTGGGCTACCTTCAAGCTGGTGTTGCAGCTCTCATTGGCTTAGCTTCCCTTGTTGTCATAGCACTCCCTATTCAAGGTGTGCTCGGAAACATTGTGGGAAAAGTTCGCGCCCGGAATGCTGTAAAAACCGATGAGAGGATCAAATTAATGAGCGAAGTCATTAGCGGCATTCAGGTGATCAAAATGTACGCATGGGAAGTACCGTTCCAAAAATCGGTGGCTGAGAAACGTAGCGACGAGCTAAAAGAAGTCCGTACAGCGACTATACTGAGAACCATATTCCTTGGCTTCATGATATTCACAGAGAGGGCTGCACTTTTCATAACAATACTTACTTTTATATTATTGGGTAATGCATTAAGTGCCACTGTGATTTATCCCTTACAACAATTCATGAACGCTGCACAACTCAATATCACATTGATTCTACCTCTCATTCTGACTTTCACTGCCGAATTAATGGTGTCTCTTCGACGAGTTCAGGAGTTTCTCGTCGCAGAGGATCGGCCAGATTTAGTGAAGCGAGATTCATTGATGCCTGCTGGTTCGAACATATTCCGTAATGTAACTGGAAGTTTCCGTAAATCTGAGCCAACTGTTAGACCGCTATCGTACAGCCAGAAAACCGAAATATTACCTACCGACTTCAACTCTAGCAACAATCTGGTAAAACGTAACAATTCAAGACTCTTAAGACGCATGTCTCATCTGGACGACACGGCCGTGGTGTTACACGATGTCTCCGCTAGCTGGACAGGCGACCCAAATTTCTTAGCTATCAAGAATATCTCAATGAAACTCCGCAAAGGGAAACTATGCGTTATCATTGGCGCCGTCGGGTCTGGGAAGTCTTCAATTCTGCAACTGCTTCTAAAGGAATTGCCTCCGGCCACTGGCACAGTTTCAATCTATGGAAAGGTTTCGTACGCCAGCCAAGAGGCGTGGCTTTTCCCTAGTACCGTCCGGGAAAACATACTTTTCGGTTTACCGTTTGAGCCGGAAAAATATAAGATGGTTTGCAAAGCATGTGCATTGGAAAAGGACTTTAAACAATTCCCATACGGAGACCAGACGTTGGTGGGAGAGAGAGGGGTGTCACTATCGGGAGGACAGCGGGCCAGAATCAATTTAGCTCGTTCTGTCTACAGAGAGGCCGACATCTACTTACTGGACGACCCGCTATCTGCAGTTGACGCGAATGTGGGGAGACAGCTTTTTGAAGGCTGCATAAATGGATACCTTCGACAACGCACGAGGATACTTGTCACGCATCAGATACACTTCCTCAAAGCTGCTGACTACATTGTCGTCATGAACGAGGGCCGCATCGAGAACATGGGAACATTCGATGAGCTCACCGCCGCAGGCAAGGCATTCTCCTTGATGTTATCTTCGCTACAAGAAAACAAAGAAAAAGACACCGAAAGTTTGGGATCACGGGGCAAAGAAGAAAAAGAAAATCCGGTTTTATTTAAAAATCAATTGTCTATAATTGAGACTGATGATTTAGAGCAATTTGAAGCTCAGAAGATGGCCGACGAAGAGCGCCAGTCCGGTAATCTAAAGTGGTCAGTGATCGCGGCATACTTCCGAGCCGGAGGAAACATCTGTTTTTTGTTGTTCACCTTTTTGCTGATCATCCTGACAGCGGCTTCCTCGGCTGGCGCTGACTACTGGATCAGTTACTGGACGAATGCAATGGCAGCGTATGACGAAGAGTTAGCAGGTGCTGAAGTGGATACAGGCCTAGATGTTCAAGTGGGACTGTTCACGACCGGCCAATATCTCATGATTCACGGAGCCATAGTATTAGTTACGATTTTCATAACCAATATAAGAGTTATTCCTTTCGCGGAGTTGTGCGTCACCGCTTCGAGTAGACTCCACAACAGCATGTTCTCCACAATGATCAAAGGCATCATGAGGTTTTTCGATACGAGCTCTTCAGGGCGTATTCTCAATCGTTTCACTAAGGACATGGGAGCTTTGGACGAGATATTGCCGAGGACTCTGTTGGACGTGCTTCAAATCTACGCCACTCTTGGAGCTATTCTCGTTTTGAACGCAATCGCACTGTATTGGACATTGATTCCTTCTGTTATACTTCTGACTTTGTTCTACTTCTTTGTCAAAGTCTATCTTAAAACCGCACAAAGCATTAAAAGATTGGAGGGAACAACAAAAAGCCCGGTGTTTGGCATGGTGACGTCATCGCTAAACGGTATAGCTACAATCAGGTCTTCGGGAGCGGAGGACCGATTAATCAGCAACTTCGATGTACTTCAGGACTTACATTCATCCGCCTGGAACGGTTACTTGGGCGGAGGCACCACTTTTGGTTTTTATTTGGACACGATGTGCCTCTTATATCTCACTACCGTTATTTTAGTGTTCATCTTTATAGACTTTGGTAACGTCATTGCCGTGGGAAGTGTCGGTCTGGCAGTAACACAGAGTAACACGCTGACGGCCATGTTGCAACACGGAGCTCGGATGCTGGTAGAGTTCCTCGCCCAGCTTACCAGCGTCGAGAGAGTACTAGAGTATACTAAAATTGAATCGGAGAAGAATCTTTTTGAAGGACAAAAACCGATGCCCCCAACTTGGCCGGCGCATGGAAGAATTATTATGGACAATGTCAGCTTACAGTACGCTCCCGAAGAAGAAGCAGTGCTGAAAAACCTCAACATCGTTATTGAAAGTGGATGGAAGGTCGGTATAGTCGGCAGGACTGGAGCAGGAAAATCCTCACTGATATCCGCCTTGTTCAGATTCGCGTATATCGATGGCTCTATAACTATCGACGGGCTCGACACTTCTGTTATATCGAAACAGGGACTCCGATCAAAAATCTCGATAATTCCGCAAGAACCGGTATTATTCTCTGCGACTATCAGATACAACTTAGATCCGTTCAGCGTGTACAGTGACGACGAGCTTTGGAGGGCGTTAGAACAGGTGGACATGAAAGCGGCCGTTCCTTCGTTGGATTTCAAAGTGACAGAAGGTGGATCTAACTTCTCCGTGGGCCAAAGACAGCTGATGTGCTTGGCACGAGCCATACTCAGATCCAATAAAATTTTAATTATGGACGAGGCCACAGCCAACGTTGATCCTCAAACGGATAATTTCATTCAGCAGACTATACGGCGTGCTTTTGCTTCATGTACCGTATTGACTATTGCACATCGCTTGAACACGATCATGGATTCGGACCGAGTTCTGGTAATGAGTACCGGAGAGGTGGCAGAATTCGATCATCCATACATTCTTATGTCCGATCCCAATAGTCACCTTTCTAGTATGGTACGAGAAACGGGCGAGAAGAATAGCTTAAAGTTATTTGAAGTTGCCAAAGATGCGTATTTCCAAAGTAATCTGAAAGAAAACATGAGATGA

Protein sequence (1364 aa)

MGVGSEKVDEKKKKKQLPTMKEPPGAFSRSLFCWMFPLFYRGNYRDLEEEDLVPPKNQYNSKLVGDQLERAWLLEEHNARAAGRDPSLIKVLFKTFGWSFLPGGILQFGFAILRIITPLLFGELLTYWTVDPPITQMEAVYYALSMIIINWIAAYLNHHGNLFCSQFGMKLRIATSSLMFRKVMRMNNGALGDTTAGKVVNILSNDLQRYDNAFIFLHFVWIIPIQLVAVCYLGYLQAGVAALIGLASLVVIALPIQGVLGNIVGKVRARNAVKTDERIKLMSEVISGIQVIKMYAWEVPFQKSVAEKRSDELKEVRTATILRTIFLGFMIFTERAALFITILTFILLGNALSATVIYPLQQFMNAAQLNITLILPLILTFTAELMVSLRRVQEFLVAEDRPDLVKRDSLMPAGSNIFRNVTGSFRKSEPTVRPLSYSQKTEILPTDFNSSNNLVKRNNSRLLRRMSHLDDTAVVLHDVSASWTGDPNFLAIKNISMKLRKGKLCVIIGAVGSGKSSILQLLLKELPPATGTVSIYGKVSYASQEAWLFPSTVRENILFGLPFEPEKYKMVCKACALEKDFKQFPYGDQTLVGERGVSLSGGQRARINLARSVYREADIYLLDDPLSAVDANVGRQLFEGCINGYLRQRTRILVTHQIHFLKAADYIVVMNEGRIENMGTFDELTAAGKAFSLMLSSLQENKEKDTESLGSRGKEEKENPVLFKNQLSIIETDDLEQFEAQKMADEERQSGNLKWSVIAAYFRAGGNICFLLFTFLLIILTAASSAGADYWISYWTNAMAAYDEELAGAEVDTGLDVQVGLFTTGQYLMIHGAIVLVTIFITNIRVIPFAELCVTASSRLHNSMFSTMIKGIMRFFDTSSSGRILNRFTKDMGALDEILPRTLLDVLQIYATLGAILVLNAIALYWTLIPSVILLTLFYFFVKVYLKTAQSIKRLEGTTKSPVFGMVTSSLNGIATIRSSGAEDRLISNFDVLQDLHSSAWNGYLGGGTTFGFYLDTMCLLYLTTVILVFIFIDFGNVIAVGSVGLAVTQSNTLTAMLQHGARMLVEFLAQLTSVERVLEYTKIESEKNLFEGQKPMPPTWPAHGRIIMDNVSLQYAPEEEAVLKNLNIVIESGWKVGIVGRTGAGKSSLISALFRFAYIDGSITIDGLDTSVISKQGLRSKISIIPQEPVLFSATIRYNLDPFSVYSDDELWRALEQVDMKAAVPSLDFKVTEGGSNFSVGQRQLMCLARAILRSNKILIMDEATANVDPQTDNFIQQTIRRAFASCTVLTIAHRLNTIMDSDRVLVMSTGEVAEFDHPYILMSDPNSHLSSMVRETGEKNSLKLFEVAKDAYFQSNLKENMR

Corresponding sequences in KAIKObase version 1

BMgn007735BMgn016196

Domains and motifs

DatabaseIDDescriptionStartEndEvalueInterPro ID
PANTHERPTHR24223- 251280.0 -
PANTHERPTHR24223:SF334- 251280.0 -
Gene3D1.20.1560.10- 764037.0e-16 IPR036640
SUPERFAMILYSSF90123- 893831.6e-31 IPR036640
CDDcd18579ABC_6TM_ABCC_D1 1033929.7e-89 -
ProSiteProfilesPS50929ABC transporter integral membrane type-1 fused domain profile. 10338329.797 IPR011527
PfamPF00664ABC transporter transmembrane region 1083461.7e-23 IPR011527
PANTHERPTHR24223- 1394030.0 -
PANTHERPTHR24223:SF334- 1394030.0 -
Gene3D3.40.50.300- 4477204.9e-76 -
PANTHERPTHR24223- 46013560.0 -
PANTHERPTHR24223:SF334- 46013560.0 -
SUPERFAMILYSSF52540- 4716951.4e-56 IPR027417
CDDcd03250ABCC_MRP_domain1 4746745.6e-105 -
ProSiteProfilesPS50893ATP-binding cassette, ABC transporter-type domain profile. 47469724.03 IPR003439
PfamPF00005ABC transporter 4936264.6e-21 IPR003439
SMARTSM00382- 5016761.4e-07 IPR003593
ProSitePatternsPS00211ABC transporters family signature. 599613- IPR017871
Gene3D1.20.1560.10- 73610894.8e-31 IPR036640
SUPERFAMILYSSF90123- 76810871.6e-43 IPR036640
PfamPF00664ABC transporter transmembrane region 77210279.0e-23 IPR011527
ProSiteProfilesPS50929ABC transporter integral membrane type-1 fused domain profile. 772107026.205 IPR011527
CDDcd18601ABC_6TM_MRP4_D2_like 78810821.5e-77 -
Gene3D3.40.50.300- 109113371.3e-77 -
SUPERFAMILYSSF52540- 109613294.7e-64 IPR027417
CDDcd03244ABCC_MRP_domain2 110513208.1e-122 -
ProSiteProfilesPS50893ATP-binding cassette, ABC transporter-type domain profile. 1107133615.593 IPR003439
PfamPF00005ABC transporter 112412672.0e-28 IPR003439
SMARTSM00382- 113313132.6e-10 IPR003593
ProSitePatternsPS00211ABC transporters family signature. 12391253- IPR017871

InterPro assignment

InterPro IDInterPro description
IPR003439ABC transporter-like
IPR003593AAA+ ATPase domain
IPR011527ABC transporter type 1, transmembrane domain
IPR017871ABC transporter, conserved site
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR036640ABC transporter type 1, transmembrane domain superfamily

Gene ontology (GO) assignment

GO categoryGO IDGO description
molecular functionGO:0005524ATP binding
cellular componentGO:0016021integral component of membrane
molecular functionGO:0016887ATPase activity
molecular functionGO:0042626ATPase-coupled transmembrane transporter activity
biological processGO:0055085transmembrane transport
SpeciesAccession
Danaus plexippusDPOGS208065
Heliconius melpomeneHMEL003355g1.t1
Manduca sextaXP_030036633.1
Plutella xylostellag10357.t1
Spodoptera frugiperda (corn)GSSPFG00033000001.2-PA
GSSPFG00033001001.3-PA
Spodoptera frugiperda (rice)SFRICE002620-PA
Acyrthosiphon pisum -
Aedes aegypti -
Anopheles gambiae -
Apis mellifera -
Drosophila melanogaster -
Tribolium castaneum -
Homo sapiens -
Mus musculus -

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value (transcripts per million (TPM))
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO08968:

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value with log10 conversion (value of transcripts per million (TPM) plus 1 is used to avoid negative output)
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO08968: