Position
| Chromosome | chr14 |
| Start | 2222466 |
| End | 2266456 |
| Strand | + |
view in Gbrowse: chr14:2222466..2266456
Most similar sequence in NCBI nr database
| Accession | Description | E-value | Score |
|---|---|---|---|
| XP_028035612.1 | retinal-specific ATP-binding cassette transporter-like isoform X1 | 0.0 | 1826 |
ORF sequence (6057 bp)
ATGAAGATCACTCTAACGGGCCCAGTCAAGAACAACTCGACGTTCTACCAAGCGAACGCGACCTTCGAAACAATGATAAAAATGATGAACTTAGTTCATTCGTTCGCCGCCACCTTCCCCTCCCTGGAGACAATGCTGGACCACCGACACGGACTATTAGTCCTCAAAACGCTGGTCACCGATCCCAAGTTTGAAGGACTTAGAAATATGATCATAGGAGACGTGGGCGTTCCAGATTTGGATGTTGATGGCATCTTTGACCAGTTAGGAGACTTAAAGGGTATCGGCAGTCTACTGTCCAAAGCATCGGACCTCCTCCACTGCTTCAACATGAACCGATTCAAGCCCTCAACGGACGAAGAAGGGATGACAATCGAAGCCGCCAGACTGTCGCAACTCGACGAATTTTCAGCTGGTATCGTGTTCATGAACACGAAACAACAAAATGGTTCTCTCTCGAATGTGGAGTATAAGATTAGAATGGATTATGAAAATGTTCCCGCAACGCGATGGACGAAGAATTATCTCTGGATCCCGGGACCCGAGTCCAGCTTCGTAGAGGAGATGCGTTACTTCCGCGGCTTCGTTCAGATCCAGGATATGATCGACCGTGCCGTCATCCAGCTCTCGAGGAAGAGACACAAGCGGGACGCTGATGATGAAGTGGACTGGGCGATGTACACGCAACAGGAGCCATACCCGTGTTACAGGAAAGATTTATTCCAAACGTCTCTGTATGAGTCCCAGGCGCTGATCGTGGCCTTCTTCTTCTCGCTCGTGTTCACCGTCGCTTCAGCCATAAGGTTCATAGTTTCCGACAAAGAGTCCGGCAACACTATGTTGATGTACGTGATGGGCGTGGAGGTGCGGTGGCAGTCACTGTCGTGGGCGGCGTGCACGGCGGCGGAGCTGGCGGTGAGCGCGTGCGGCGCGGCGGCAGTTCTACACTTCGGCCGCGTTCTGCCGCACTCAGACCCCACCCTGCTGCTGGTGCTGTTGCTCATATTCGTCGTCTCCGTGCTCAGTTTCTGCTACATGATGTCTAAGCTGTTCTCCTCGGCGAGTCTAGCGGCGGTGTGCACTGCGCTGACCTACATGATCACTTTCATGCCCTTCGTTCTCATCTTGTCCCTGGAGGCTGTCATGAACAGCCAGTTGAAGATGTTAGTGTGTCTCTCGATGTCCTCGTCGCTCTGCTACGCGTTCCTGCTGGTGACGCGGCGGGAGGCGGCGGGGGGCGGCGCGGAGTGGGGCATCGGCCTCGCGGCGCTCATGATGATCTTCGACACGTGCCTTTATCTGTTCATTGGATGGCTCATAGATAAATATTTCGGTATGCAGACCTTACAGAGCAACATCACCAATTGCCATACCACAGACGAGAAGGCCGGCGTTAGTATACTGAACGTTACCAAGATCTATGGTGAGGGAAGCCGTCGCCCCAAGCTGGCTCTGGACAATGTCTCCATTGAACTACAAAAAGGCCAGATCACTACATTACTGGGACACAATGGCGCTGGGAAAACAACTTTGATTAAAATCTTAATGGGAATGCTGAAGCCGACTAAGGGCCACATCATAGTGCGCTCGGACCGCGGCGGAGGCACGGAGCTGGGCGTGTGTCCGCAGAAGGACGTGCTCTTTGAGTACATGACCGCGGAGGAGCACATCCAGCTGTACGCGCAGCTCAAGACCGGCCTCGGGCCGCGGGAGGTCCAGGATGAGGTCGACAGGATGATCCGGGCGCTCTCCCTGGATAGCCAGGTCCGCCAGGCGGTGTCGCGGTGGTCGGGCGGCGCGCGGCGGCGGCTGTGCGTGGCGCTGGCCTTCCTCGGGGACCCGCGCCTCGTGTCGCTCGACGAGCCCACCAGCGGGGTCGACCCGGCCGCGAGAAGAGAAATCTGGTCAATGATAGTGAAACTGAAAGAGGACCGGACGATCCTCCTCACGACGCATCATCTCGACGAAGCGGAGTTGCTAAGCGACCAAATCGTCATCATGCATAAGGGCCAAGTCCACACAACAGGCTCTCCGGTGGAGATAAAACGCACCCTGGGCAACGGGTACAAGCTAACCGTGGTCTTCCCCGAGACGACCTGCGAAGATCGCCCTGAAGACCTGGATGAGAAGACCAAACAACTGCTCTCTACCGTCAGGGACGACGTCAAGAACGCCAACATCGTCGATGTTAACGACACTGATGTGGAGATTCTACTGCCTTTCTATGACGCTGACGGACTTAGCAATGACCTACATCGCCTATGCTTGAACTTGGAGTCCCAGCAGCCAGTCCTCGGCTATAAGACCTACGCCATGGACTGCAGCAGTCTCGAGCAGGTGTTCTGTGACATCTGCACTCAAGCCGACCTAGGAGCATCTCAGACTGACGAGTCGAAATACGTATCCATAGAGTCGCCGTCTGAAGCGTCCGCCAGCACGAGGTCCCGTGGGGGGCGGGCGGGGGGCGCGGTGCGGGGGGCGGTGCGCGGGGAGGGCGCCCTGCGAGCCTCGTGCCGGGAGATGTTCGCGGCCCTCATGTACGCGCGGTACTTGCATCACGTCCGAAATAGATGGTTAATGTTCATGTTACTACTCCTGCCGTCGGTTTTCGTAACAGTAGCTATGGGATTCTCGTCTTTAAGACCGCCGGCTGTCAAAGAAATAGCTCTAAAATTAAATGCAGACCTGTACGAAGGATCTACGCAGTATATTGTACTCCTGCATGACGACATACAATGCTGCGTCGCTGTAGATGGTGAACAGACGGGCTTCTTTCCCGTTACGTGTGGGGTGAAGCAAGGATGCGTCTTAGCGCCTACTCTGTTCGCCTTGTACTTTGCGGTCGTAGTTAGAGAGGTTCTACAAACTGTTTCCCAAGGAGTCCGCATCCGCTTCCGTACGGACGGCAGCCTTTTCAATTTGGCTAGACTTAAGGCTCGCACCAAAGTGTCGTATGCATTGATCACTGAGATCATGTATGCTGATGACTTGTGCTTTTTAGCAGAATCCCCAGCCGGCCTGCAACAGCTGATGTCCGTTTTTCACCTAGCCTGCGGTAAATTCGGCCTGAAGATTAGTGTCAATAAGACGGAGGTGATGTCCCTGGACAGTCACGGTCACGAGGCACTAACCATAAAGCTTGGTGAGGATGTGTTGAAGCAGGTGGATAAATTTCGCTATCTGGGGAACACTTTAACATCCAAGTGTGGCCTTGATGATGAGATCAATAGCAGGGTTGGTGCCGCTGCTGCGGCATTTGGCAAGCTATGTTCCAAGGTCTTCTGCTCGCATGACCTTAAGTTGGCCACTAAAATTTCACTCCGGTGGTGCGGTCATGTATCACGCATGACGGAGGAAAGAGTGGCGAAGCGCATTTTCTTCTCTGAACTACAGGATGGCAAGCGAAAGCATGGCGGACAGCTCCTGCGGTACAAGGACGTCGTGAAACGACACATGAAGAGATGTGATATAGAGCCCTCTCAATGGGAGCGCTTGGCAGCACAGCGGCCAGAATGGCGCAGGATGGTGAACAGCAAAGTACGCGACTTCGAGGATCAGCGTAAAGCTGACCTTGATTACAAACGCGACCAGTTGAAGGCCCGCCCACCTGCTGTCATAACCTATAATTATGGGAACGGCGTGCTTACGCTGCAGCCGTCTACGTATGAGAACAACGACGAAAAGTACGTAGGGTTCGGCGTTGACGTCCTCCAGAACATAGCTGGCGGTAACAACGTGACCACGTGGACTAGTAAGGACAATCCTTCGTGCACGTGCAACATAACGCGGCAGATCTGCGACGGAGACCCGGCTGCGGTCAGCACGCTGGCCATGATGGCGCTACCTGATGTGGATACACTCAACGAATGGCTGCTGACTTCACACGAAATATACATTGAGAAGAGATACGGCGGCTTCTCGTCGACAGTCAGAGACAACAAGACAAACTTCATAACGTGGTACAACAACAAGGGTCATCATGCGCTACCGTCATATCTCAACGTCATGAACAACGCCATCTATCGGACGGTGAGCGGTAACCGTCGTGCAAACATCACAGTATACACACATCCGTTGAAGATATCCAGTGAAAAGATCAACAAAGCCACTTTGTATCAGCACATAGCAGACGCTGGCATATCGAGCCTGGTGCTGGTGGCGTACGGGCTGGTGAGCGCGGGCGCGGGCGTGTGGCTGGTGGCGGCGCGCACCTCGCAGCAGAAGCGGCTCCAGCTACTCTGCGGAGTCAGCCCACTAATGTACTGGACCGCTGCACTCACTTGGGATGTCATTATCATCTTCATAAATATGATAATAACGGCGATGGTAATGTTGGCGTTCGGCTTCCCCGTGTTCGTGGCGAAAAACAACTTGCCGGCGATATGCGTACTCATTATGTTATATGGATTTGCGTGCGGTAACCTCGTCCATCTGTTGGAGAAGCTGTTTACGGAAGCTAGCCTAGCCAACATGGTGTTGTTCTGCGCGAATTCCTTGCTGGGGCTCGCCGGGATGACAATACTTCTCATACTCGACATCATATCGGATTCCGACGCAACAGACAACGCTCGGTGGATCTTACACAAGATATTCTTGATAGCTCCACAGTTCGCGCTGGGTGACGGATTACTGGAAATAGCCAAGAACACTATTCAGTCGGAGGTGTTAAGCCGTTTCGGTATGGACACGTATCAAGATCCGTTCAGGTCCAGTTTGCTAAGACTCCACGTGTTGGCGCTGGTAGTGGTAGGCGGAGCCCTCTTCCTACTCAACCTGGCCATCGAGTACGATTGCTTCGAAATATTTCTTGGCAGGTTGAGACGCGAGAAGATGCCGCAGACGAACTACGAAGAATTGGAGCCCGTGGAAGTCGCTGAGGAGAGGAAGAAGGTGCGAGCGGCACTGTTGCACTCCGCTCAGGGACACATCCGGGTCAACACCATCGGCAATATTAATAGGGGCTACGTACATACGGAGTGCGACGGCAAGCGAGTGCGGCGGGCGGCGCGTGGCGGCGGCGCCGGCGTGGCGCAATGTGTGCGGCTCGGCAAGATGTACCGCCGCCCCGCGCTCGTGGACCTCACGCTCTCGCTGCCTGAGGGACAGTGCACAGCGTTACTCGGAGAGAACGGCGCTGGTAAATCCACGACCTTCTCGATACTGACCGGGGAGATCCGACCTACTGCCGGTGAAGTGTACCTCAATGAACAGAAGATGACCCCTAGGAAACTCTGTCAAGGACTTATAAGTTACTGTCCACAAAGCGACGCTATAGACCCCCTGCTGACGGTCAGAGAGATCCTGTCCTTCTACTGCCAGTTAAGAGGAATAACTGACCAGGACGATGTGATAAAAAGAACATTAGCGATGTTTGAATTGAATTCATACAGTGACGTGCTGAGTGGAAATCTTAGTGGCGGAAACAAAAGGAAGTTGTGCACCGCTATTGCGTTCATGGGAAGAAATCCGCTTGTCCTACTCGATGAGCCGACCAGCGGTATGGACGCGTCGTCGGGCGCGGCGGTGTGCGAGCGGGCGCGCGAGTGCGCGGGCGAGGGCCGCGCCGTGCTCGTGGCCACACACGCGCTGCGGGACGCGCGACGTCTGGCCGCGCGCATCGCACTCCTGCGGAAGGGACGCCTCGTGGCTCTAGCGCCGCTACACGACTGCCTACAGAGGTTCGGCGGCGGGCACGTGGTGGAGTGCCGCGCGCCGGGAGCGGCGGGGGTCGCGTGGGGGACCGTGCGTGCTCGCGCCCCCTACGCCGTGCTGCGCGTGCTGCACGCACACACGCTGCAGTTCCTGCTACCCAACTACGTTACAGTTAACGAGAAGGAGACACCGATACGACTCAGCGATATATTCCGTTTGATGAACGAACTGCAGACTGCCGGTGAAATTGAGGACTACACAGTGAACCAGAGCTCGCTGGAACAGATGTTCCTAAGCTTCACGGACCAGAGGGATGTAGAAACGGGTCCCATCGAGATGGAACCTTTGCCAACGCCCGAATTTGTCAAGAGTGAAGAAGAATATGACAGCATCACCTGTCTGTAA
Protein sequence (2018 aa)
MKITLTGPVKNNSTFYQANATFETMIKMMNLVHSFAATFPSLETMLDHRHGLLVLKTLVTDPKFEGLRNMIIGDVGVPDLDVDGIFDQLGDLKGIGSLLSKASDLLHCFNMNRFKPSTDEEGMTIEAARLSQLDEFSAGIVFMNTKQQNGSLSNVEYKIRMDYENVPATRWTKNYLWIPGPESSFVEEMRYFRGFVQIQDMIDRAVIQLSRKRHKRDADDEVDWAMYTQQEPYPCYRKDLFQTSLYESQALIVAFFFSLVFTVASAIRFIVSDKESGNTMLMYVMGVEVRWQSLSWAACTAAELAVSACGAAAVLHFGRVLPHSDPTLLLVLLLIFVVSVLSFCYMMSKLFSSASLAAVCTALTYMITFMPFVLILSLEAVMNSQLKMLVCLSMSSSLCYAFLLVTRREAAGGGAEWGIGLAALMMIFDTCLYLFIGWLIDKYFGMQTLQSNITNCHTTDEKAGVSILNVTKIYGEGSRRPKLALDNVSIELQKGQITTLLGHNGAGKTTLIKILMGMLKPTKGHIIVRSDRGGGTELGVCPQKDVLFEYMTAEEHIQLYAQLKTGLGPREVQDEVDRMIRALSLDSQVRQAVSRWSGGARRRLCVALAFLGDPRLVSLDEPTSGVDPAARREIWSMIVKLKEDRTILLTTHHLDEAELLSDQIVIMHKGQVHTTGSPVEIKRTLGNGYKLTVVFPETTCEDRPEDLDEKTKQLLSTVRDDVKNANIVDVNDTDVEILLPFYDADGLSNDLHRLCLNLESQQPVLGYKTYAMDCSSLEQVFCDICTQADLGASQTDESKYVSIESPSEASASTRSRGGRAGGAVRGAVRGEGALRASCREMFAALMYARYLHHVRNRWLMFMLLLLPSVFVTVAMGFSSLRPPAVKEIALKLNADLYEGSTQYIVLLHDDIQCCVAVDGEQTGFFPVTCGVKQGCVLAPTLFALYFAVVVREVLQTVSQGVRIRFRTDGSLFNLARLKARTKVSYALITEIMYADDLCFLAESPAGLQQLMSVFHLACGKFGLKISVNKTEVMSLDSHGHEALTIKLGEDVLKQVDKFRYLGNTLTSKCGLDDEINSRVGAAAAAFGKLCSKVFCSHDLKLATKISLRWCGHVSRMTEERVAKRIFFSELQDGKRKHGGQLLRYKDVVKRHMKRCDIEPSQWERLAAQRPEWRRMVNSKVRDFEDQRKADLDYKRDQLKARPPAVITYNYGNGVLTLQPSTYENNDEKYVGFGVDVLQNIAGGNNVTTWTSKDNPSCTCNITRQICDGDPAAVSTLAMMALPDVDTLNEWLLTSHEIYIEKRYGGFSSTVRDNKTNFITWYNNKGHHALPSYLNVMNNAIYRTVSGNRRANITVYTHPLKISSEKINKATLYQHIADAGISSLVLVAYGLVSAGAGVWLVAARTSQQKRLQLLCGVSPLMYWTAALTWDVIIIFINMIITAMVMLAFGFPVFVAKNNLPAICVLIMLYGFACGNLVHLLEKLFTEASLANMVLFCANSLLGLAGMTILLILDIISDSDATDNARWILHKIFLIAPQFALGDGLLEIAKNTIQSEVLSRFGMDTYQDPFRSSLLRLHVLALVVVGGALFLLNLAIEYDCFEIFLGRLRREKMPQTNYEELEPVEVAEERKKVRAALLHSAQGHIRVNTIGNINRGYVHTECDGKRVRRAARGGGAGVAQCVRLGKMYRRPALVDLTLSLPEGQCTALLGENGAGKSTTFSILTGEIRPTAGEVYLNEQKMTPRKLCQGLISYCPQSDAIDPLLTVREILSFYCQLRGITDQDDVIKRTLAMFELNSYSDVLSGNLSGGNKRKLCTAIAFMGRNPLVLLDEPTSGMDASSGAAVCERARECAGEGRAVLVATHALRDARRLAARIALLRKGRLVALAPLHDCLQRFGGGHVVECRAPGAAGVAWGTVRARAPYAVLRVLHAHTLQFLLPNYVTVNEKETPIRLSDIFRLMNELQTAGEIEDYTVNQSSLEQMFLSFTDQRDVETGPIEMEPLPTPEFVKSEEEYDSITCL
Domains and motifs
| Database | ID | Description | Start | End | Evalue | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | PTHR19229 | - | 149 | 1988 | 0.0 | IPR026082 |
| Pfam | PF12698 | ABC-2 family transporter protein | 243 | 439 | 1.7e-14 | - |
| Gene3D | 3.40.50.300 | - | 461 | 731 | 1.4e-59 | - |
| CDD | cd03263 | ABC_subfamily_A | 465 | 682 | 7.2e-85 | - |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 465 | 694 | 22.116 | IPR003439 |
| SUPERFAMILY | SSF52540 | - | 467 | 683 | 1.0e-52 | IPR027417 |
| Pfam | PF00005 | ABC transporter | 485 | 624 | 1.8e-25 | IPR003439 |
| SMART | SM00382 | - | 494 | 671 | 1.8e-09 | IPR003593 |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 911 | 1064 | 1.7e-17 | IPR000477 |
| Pfam | PF12698 | ABC-2 family transporter protein | 1286 | 1592 | 5.9e-31 | - |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1674 | 1903 | 17.954 | IPR003439 |
| Gene3D | 3.40.50.300 | - | 1678 | 1901 | 5.9e-53 | - |
| CDD | cd03263 | ABC_subfamily_A | 1682 | 1884 | 1.5e-69 | - |
| SUPERFAMILY | SSF52540 | - | 1688 | 1894 | 3.5e-47 | IPR027417 |
| Pfam | PF00005 | ABC transporter | 1693 | 1832 | 8.7e-27 | IPR003439 |
| SMART | SM00382 | - | 1700 | 1880 | 2.0e-06 | IPR003593 |
InterPro assignment
| InterPro ID | InterPro description |
|---|---|
| IPR000477 | Reverse transcriptase domain |
| IPR003439 | ABC transporter-like |
| IPR003593 | AAA+ ATPase domain |
| IPR026082 | ABC transporter A |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Gene ontology (GO) assignment
| GO category | GO ID | GO description |
|---|---|---|
| molecular function | GO:0005524 | ATP binding |
| cellular component | GO:0016021 | integral component of membrane |
| molecular function | GO:0016887 | ATPase activity |
| molecular function | GO:0042626 | ATPase-coupled transmembrane transporter activity |
| biological process | GO:0055085 | transmembrane transport |
| Species | Accession |
|---|---|
| Danaus plexippus | DPOGS213319 |
| Heliconius melpomene | HMEL010559g1.t1 |
| Manduca sexta | XP_030023361.1 |
| Plutella xylostella | g9182.t1 |
| Spodoptera frugiperda (corn) | GSSPFG00019200001-PA GSSPFG00022368001-PA |
| Spodoptera frugiperda (rice) | SFRICE000411-PA |
| Acyrthosiphon pisum | XP_003246127.1 XP_029344491.1 XP_029344492.1 |
| Aedes aegypti | AAEL018040-PB AAEL018040-PC |
| Anopheles gambiae | AGAP029588-PA |
| Apis mellifera | XP_397465.5 |
| Drosophila melanogaster | FBpp0110124 FBpp0288866 FBpp0309770 |
| Tribolium castaneum | - |
| Homo sapiens | - |
| Mus musculus | - |