KWMTBOMO07532

Position

ChromosomeChr12
Start16526080
End16537748
Strand+

view in Gbrowse: Chr12:16526080..16537748

Most similar sequence in NCBI nr database

AccessionDescriptionE-valueScore
XP_012545154.1ATP-binding cassette sub-family G member 10.01534

ORF sequence (2262 bp)

ATGATCATGGGCATCAGGACACATGATGGTAATTGCGCGATGACGCCCGGCCTGAAAATGGAATCGAAAGGCACCCAGATACACTTACCGCTGATGGGGCGTGGGAGCAGAGGCGAGCTCAATGATAAAGTCACGTTCTCCCAGGGCAAAACCTTCACGGAGCAGCTCAATAATGGCCAAGTACTTGGTGGCTCCCAAATGAACCTATGCAATGGCGCTGCGGGTGCAGCAGGAATCACAACTCTCGTTCCCAAGATCCCAAATGGCTATGGAGATCAGAAAAAACCAATGGCGACTCTCACACACCTGCCAAAAAGACCTCCAGTGGACATAGAGTTCTCTGATTTATCCTATTCAGTCAGCGAGGGCAGGAAGAGAGGTTACAAGTCCTTGCTTAAATGTATCAATGGTACCTTTCGATCAGGGGAGCTGACAGCCATTATGGGACCTTCGGGGGCAGGGAAGAGCACACTCATGAACATTCTAGCCGGATATAAAACATCAAACGTCAGCGGATCAATCCTGATAAACGGAAAAGAAAGAAATTTGAGAAGATTCAGAAAACTATCCTGTTATATAATGCAGGATGACTGCCTTCTACCACATTTGACGGTCCGGGAGGCGATGTATGTATCAGCTAACCTGAAACTAGGGAAGGACATGACAGCTACAACAAAGAAGATAGTCATCGATGAAATATTAGAAATGCTCGGTCTTATCGAGGCCGGTGATACTAGGACCATAAATCTATCAGGAGGACAGAAAAAAAGACTATCAATAGCCTTGGAGCTAGTTAACAATCCACCGGTAATGTTCTTTGATGAACCAACTTCTGGATTGGATAGTTCCTCGTGTTTCCAATGCATATCATTATTAAAATCTTTGGCTAGAGGCGGCAGGACGATAATCTGTACTATCCATCAACCGTCTGCCCGATTATTTGAGATGTTTGACTTTTTATACACGTTGACCGATGGGCAGTGTATCTACCAAGGGAAGGTCACGGGTCTCGTGCCATTTTTGTCGTCGATGGGGCTCCACTGCCCAAGCTACCATAACCCTGCTGATTATTTAATGGAGGTAGCAAGCGGTGAACACGGTGAGTGGGTTCACAAGCTAGTAAGAGCCGTGAATAAAGGAAACTGCGGACGGGGACAGTCTTCTTCCACATCATCATCATCATCGTCCGTGCCTCAGAATGTAAATTACAATAATCAACCGAATAAAAATAATACTCAGAAAGAAGCTCTTTCTATAGTTGTTGACAAACCAACGTGTACTGTGATAGACATGTCAGAACCGGTACTCAATACCGAAAAGCAGAACATTCCAAACTCTACGAACCTCGCTCCTGTAACCTGCACCACTTCACTATTAGACTCCAGCGAGAGTTTCACAAAGAAGCCAGTTAAAACCGGTTTCCCGACGTCAGGGTGGAAGCAATTTTGGATCTTATTGAAGCGAACCTTCCGAAGTATTCTTAGAGACCAGACATTGACGCATTTAAGACTATGTTCGCATACGATCGTGGGATTGTTGATTGGCTTCCTCTATTACGATATAGGGAACGATGCCGCCAAAGTGATGAGCAATGCTGGATGCATTTTTTTTACCGTGATGTTCACCATGTTTACTGCCATGATGCCTACCATACTCACATTCCCGACAGAGATGAGCGTATTCGTGAGAGAACATTTAAATTACTGGTATTCGTTGAAGGCTTTCTATTTCGCAAAAACAATGGCAGATCTACCATTTCAGATAATATTCAGTGGCGTCTACGTGATCATAGTGTACTTCATGACGGGCCAGCCGATGCAGACCGATCGAGTGCTGATGTTCACGACCATCAACATACTCACGGCGCTAGTCTCCCAGTCTCTAGGACTTCTCATCGGTGCCGCCATGAAGATCGAGACTGGGGTGTACCTGGGACCGGTCACGACAATACCCGTCGTCTTATTCTCCGGTTTCTTCGTGAACTTCAACGCAATACCAAACTACCTTCGATGGCTGACGTACTTAAGCTATGTTAGATATGGCTTCGAAGGAGCCATGCTGTCGGTTTACGGGTTCGGAAGGGAGAAGCTGTATTGTTCGGAAGCATACTGCCATTTCCGGAACCCAGATCTCTTCTTGAAGGAAATGACGATGGATAAATCGAACTTTTGGATCGACGTTGGAGCTTTAAGCGCTCTGTTCGTCTTCATAAGAGTAATCTCATATTTAGTTCTAAGGTTTAAGTTGAAGATGATGCAATAA

Protein sequence (753 aa)

MIMGIRTHDGNCAMTPGLKMESKGTQIHLPLMGRGSRGELNDKVTFSQGKTFTEQLNNGQVLGGSQMNLCNGAAGAAGITTLVPKIPNGYGDQKKPMATLTHLPKRPPVDIEFSDLSYSVSEGRKRGYKSLLKCINGTFRSGELTAIMGPSGAGKSTLMNILAGYKTSNVSGSILINGKERNLRRFRKLSCYIMQDDCLLPHLTVREAMYVSANLKLGKDMTATTKKIVIDEILEMLGLIEAGDTRTINLSGGQKKRLSIALELVNNPPVMFFDEPTSGLDSSSCFQCISLLKSLARGGRTIICTIHQPSARLFEMFDFLYTLTDGQCIYQGKVTGLVPFLSSMGLHCPSYHNPADYLMEVASGEHGEWVHKLVRAVNKGNCGRGQSSSTSSSSSSVPQNVNYNNQPNKNNTQKEALSIVVDKPTCTVIDMSEPVLNTEKQNIPNSTNLAPVTCTTSLLDSSESFTKKPVKTGFPTSGWKQFWILLKRTFRSILRDQTLTHLRLCSHTIVGLLIGFLYYDIGNDAAKVMSNAGCIFFTVMFTMFTAMMPTILTFPTEMSVFVREHLNYWYSLKAFYFAKTMADLPFQIIFSGVYVIIVYFMTGQPMQTDRVLMFTTINILTALVSQSLGLLIGAAMKIETGVYLGPVTTIPVVLFSGFFVNFNAIPNYLRWLTYLSYVRYGFEGAMLSVYGFGREKLYCSEAYCHFRNPDLFLKEMTMDKSNFWIDVGALSALFVFIRVISYLVLRFKLKMMQ

Corresponding sequences in KAIKObase version 1

BMgn005094

Domains and motifs

DatabaseIDDescriptionStartEndEvalueInterPro ID
PANTHERPTHR19241- 787500.0 -
PANTHERPTHR19241:SF211- 787500.0 -
SUPERFAMILYSSF52540- 1003591.4e-50 IPR027417
CDDcd03213ABCG_EPDR 1083321.4e-91 -
Gene3D3.40.50.300- 1113412.0e-56 -
ProSiteProfilesPS50893ATP-binding cassette, ABC transporter-type domain profile. 11135019.108 IPR003439
PfamPF00005ABC transporter 1322789.2e-29 IPR003439
SMARTSM00382- 1413351.1e-13 IPR003593
ProSitePatternsPS00211ABC transporters family signature. 250264- IPR017871
PfamPF01061ABC-2 type transporter 4816872.9e-47 IPR013525

InterPro assignment

InterPro IDInterPro description
IPR003439ABC transporter-like
IPR003593AAA+ ATPase domain
IPR013525ABC-2 type transporter
IPR017871ABC transporter, conserved site
IPR027417P-loop containing nucleoside triphosphate hydrolase

Gene ontology (GO) assignment

GO categoryGO IDGO description
molecular functionGO:0005524ATP binding
cellular componentGO:0016020membrane
molecular functionGO:0016887ATPase activity
SpeciesAccession
Danaus plexippusDPOGS200492
DPOGS204358
DPOGS212609
Heliconius melpomeneHMEL005297g1.t1
Manduca sextaXP_030020651.1
Plutella xylostellag26634.t1
Spodoptera frugiperda (corn)GSSPFG00023761001-PA
Spodoptera frugiperda (rice)SFRICE025439-PA
Acyrthosiphon pisum -
Aedes aegyptiAAEL008138-PA
Anopheles gambiaeAGAP029451-PB
Apis melliferaXP_006569435.1
Drosophila melanogasterFBpp0111811
Tribolium castaneumXP_008192597.1
XP_973458.1
Homo sapiensNP_001135977.1
NP_001335120.1
NP_071452.2
Mus musculusNP_620405.3
XP_011240723.1

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value (transcripts per million (TPM))
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO07532:

Expression data of alternative splicing isoform(s) of KWMTBOMO07532:

MSTRG.4201.1 (position: Chr12:16499406..16542149)

MSTRG.4201.2 (position: Chr12:16499428..16541992)

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value with log10 conversion (value of transcripts per million (TPM) plus 1 is used to avoid negative output)
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO07532:

Expression data of alternative splicing isoform(s) of KWMTBOMO07532:

MSTRG.4201.1 (position: Chr12:16499406..16542149)

MSTRG.4201.2 (position: Chr12:16499428..16541992)