Position
| Chromosome | chr12 |
| Start | 6944661 |
| End | 6986994 |
| Strand | + |
view in Gbrowse: chr12:6944661..6986994
Most similar sequence in NCBI nr database
| Accession | Description | E-value | Score |
|---|
| XP_028040619.1 | ATP-binding cassette sub-family G member 1-like isoform X1 | 0.0 | 1276 |
ORF sequence (1875 bp)
ATGGCAAGCGAAAATTCAGATTCCCAAGAAACGAACTCGACATCGCTCGTTGAGGATTCCCTAAATATTTCCTTTAAGAATTTAGGATATACGGTGCGAAATGGACTCCTGAGTCGAGCTCGCAAAACTATATTAGACGGTCTGTCTGGATCATTCAATGCTGGTGAGCTCACAGTTATAATGGGACACTCCGGAGCGGGAAAGAGCACACTCTTAGACATACTTGCAGGCTATACGAAGCCCACAAGTGGGAGCATATACGAAAACGGTCGTATACGAAACGAGAGAATGTTTCGGCGGAAATCCTGCTACATATTTCAAGATGATAAACTTATTGAAACGTTGACTATTAAGGAATCACTTACGATAGCAGCGGAACTGAAACTTGGAAATCATATCAGTGCGAGTCAAAAACGACAACGCGTAGAACAAATAATAATGTCTCTTGGGCTGTACGCAGTGGAGAATACTAAAGCCGGGAACCTATCAGGCGGACAAAAAAAAAGACTAACAATAGGTCTGGAACTAGTCAGCGATCCGCCCGTTATGTTCCTCGATGAACCAACAAGTGGACTAGATATTTCGGTAGCAAAAAAATTAGTCAATTTACTTCACCTGTTAGCACGGCAAGGACGAACGATGGTGATAACTATGCATCAACCTTCACTCAGTCTACTTCAGATGGTGGACAGGCTATACGCAGTCGTTGCAGGAAAGTGTGCTTATATGGGCTCCGTGCCTCTGCTACTGCCATATTTAAACCAATTGAACCTACCAGACTTAAGGTGCTTGTCGTATCATGACCCTGTTGAATATTTAATAGAAATCAGTGGGACCTATGAAGAAAAATTAGTAGAAAAGTCTAAAAATGGAAGTAACAATTGTTGGGTTACTGAAGCGACTGATAGTCCAATTCTAGAAAGACCGAAACTACTTAGAATTACTTCAACAAATGAGGAAATTAGTTTAACACTATTAACAGCTCCCAAAGAGAATTCGACAAATAAAATTATTTTGGCCCTGAAAAGCACATACTCTACCTCATTTTGGAAACAATTCATCACATTGACAAGAAGATCTGTATTAAGTACGTGGCGAGAACCTTCATTTACGTTAACATTCATAAGTATTCACGGATTCATGGCATTGTTTATTGGCATCCTATTCAAGAATGTTGGCGAAGACGTCGAAAAAGTCAGAGATAACTACAACTTTCTGTACTTCAGTCTGATGTTCCTTATGTTCAACGCATTTAGTGCCGTCTCAATCAGATTTCCGGAACAAATCCCCGTTACCCGAAGAGAACATTTCAACCGTTGGTATACGACAGGCGCTTTCTACGCGTCAACTTTACTCTCTACGCTACCCATACAGACCGTGTGCACCCTTCTATACTCAATTCTCGTATATTGGATGACAGGACAATCTCCGAATTTAATTCGATTTACAATATTCAATTTCACTTTGCTGTTAGTCTCATACGTATCACTATGTATGGGTCTCCTTAATGGATCAATATTTAACGTAAAGAATGGAGTTATATTTGGTCCGCTAATGATTATGCCGTTCACTATATTCTCCGGGTTCTTCTTGCGTTACCGCGATGCGCCGTATTTCTTCCGCTGGATGTTTCAAATATCATTCTTGAAACACGGACTCGTTGGACTCGTGCTCTCCGTCTTCGGTATGGGCCGGTCTAACTTCAGCTGCCCAAAAATATTCTGTTACTACACTTACCCTACGCAGTTATTAATAGACAACCACATGGACAAAGAAGAATTTACATTAGCGATTGGAGCACTTTTCGCTATCAGCTTCGCATTGATTGCGACTTCTTTCGTGATCCTCAAAATTAGACTGAAGAGTAAATGGTGA
Protein sequence (624 aa)
MASENSDSQETNSTSLVEDSLNISFKNLGYTVRNGLLSRARKTILDGLSGSFNAGELTVIMGHSGAGKSTLLDILAGYTKPTSGSIYENGRIRNERMFRRKSCYIFQDDKLIETLTIKESLTIAAELKLGNHISASQKRQRVEQIIMSLGLYAVENTKAGNLSGGQKKRLTIGLELVSDPPVMFLDEPTSGLDISVAKKLVNLLHLLARQGRTMVITMHQPSLSLLQMVDRLYAVVAGKCAYMGSVPLLLPYLNQLNLPDLRCLSYHDPVEYLIEISGTYEEKLVEKSKNGSNNCWVTEATDSPILERPKLLRITSTNEEISLTLLTAPKENSTNKIILALKSTYSTSFWKQFITLTRRSVLSTWREPSFTLTFISIHGFMALFIGILFKNVGEDVEKVRDNYNFLYFSLMFLMFNAFSAVSIRFPEQIPVTRREHFNRWYTTGAFYASTLLSTLPIQTVCTLLYSILVYWMTGQSPNLIRFTIFNFTLLLVSYVSLCMGLLNGSIFNVKNGVIFGPLMIMPFTIFSGFFLRYRDAPYFFRWMFQISFLKHGLVGLVLSVFGMGRSNFSCPKIFCYYTYPTQLLIDNHMDKEEFTLAIGALFAISFALIATSFVILKIRLKSKW
Domains and motifs
| Database | ID | Description | Start | End | Evalue | InterPro ID |
|---|
| PANTHER | PTHR19241 | - |
20 | 308 | 4.4e-161 |
- |
| PANTHER | PTHR19241:SF493 | - |
20 | 308 | 4.4e-161 |
- |
| Gene3D | 3.40.50.300 | - |
22 | 254 | 1.7e-57 |
- |
| SUPERFAMILY | SSF52540 | - |
22 | 245 | 5.5e-50 |
IPR027417 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. |
23 | 262 | 22.516 |
IPR003439 |
| Pfam | PF00005 | ABC transporter |
45 | 190 | 3.8e-30 |
IPR003439 |
| SMART | SM00382 | - |
54 | 239 | 2.6e-10 |
IPR003593 |
| ProSitePatterns | PS00211 | ABC transporters family signature. |
162 | 176 | - |
IPR017871 |
| PANTHER | PTHR19241 | - |
333 | 609 | 4.4e-161 |
- |
| PANTHER | PTHR19241:SF493 | - |
333 | 609 | 4.4e-161 |
- |
| Pfam | PF01061 | ABC-2 type transporter |
352 | 557 | 8.1e-38 |
IPR013525 |
InterPro assignment
Gene ontology (GO) assignment