KWMTBOMO05903

Overview
Annotation
Orthologs
Expression
Expression (Log conversion of TPMs)

Position

Chromosome	Chr10
Start	14087186
End	14120785
Strand	-

view in Gbrowse: Chr10:14087186..14120785

Most similar sequence in NCBI nr database

Accession	Description	E-value	Score
NP_001243922.1	scarlet	0.0	1382

ORF sequence (2013 bp)

ATGGGTAAAAAAGCTGATACGACAAAGAGGAGCGCCGATAACAGCCCTGAAAAGAGTGAAAGCCCTCAACCTTTGCAGAGTACTTCATATGAGCTGTTGCCTGCAGACTTAGTCTATATAGACAGCGGCATCAAGACCAGCCCCGTCAAGTATGACTCGTTATACCCTGAAGTGGAGGAGGTGTTCGGAGTCCCACGTTCGCCTCGACCCTGCACCCTCGTGTGGAGGGATGTGACAGTGCACGTGAAACTGAAAAATGGAAGATTGAAACGACTAGTTAATAATGTGAGCGGCATAGCGAAACCTGGCACTCTTATTGCTTTGATGGGACCTAGCGGTGCTGGAAAAACTACGCTCATGTCTGCATTAGCCCATCGAAGCCCATTCGGAACAGTGATAGACGGCGAAATCATCATGAACGGTCGTCCAGTCTGCAGCTACGTGGACAGAGAAAGCGGCTACATGCATCAAGACGACATCTTCGCTGAAAACCTAACAGTTATCGAGCATCTAACGGTCATGGCTCGTCTACGCATGGATAGACGCACATCAACTGTAGCCAGGAAACGCCGGGTGAATCAGTTGATGAGGCAGTTGTCTCTCTACGAGTCTAGATTCACGAGGATAGGAGGCCTCGATGGACATAAGACCTTGTCTGGTGGAGAAAGGAAAAGGCTGGCTTTCGCTACTGAATTACTAACGGATCCGGGGCTTCTGTTTTGCGACGAGCCCACCACAGGATTAGACTCCTCGTCAGCGCTGAAGCTAGTATCACTCCTCCGAGCCAGTGCAGCCCAGGGAAAGACCGTGATATGCACTATACACCAGCCCTCCTCAGAACTGATGGCACATTTCGACAAGCTAGTCTTGTTAGCTGAAGGAAGGATCGCCTTTGCGGGAAACGCATCTGCTGCTTTGGGATTTTTCGAAAGTCTCGGCTACCACTGTCCCTTAACGTACAACCCGACGGATTACTTCATAAAAGTGTTGGCTTTAACTCCTGGCTCCGAAGCTGCGTCACGTCACGCTATCAAGAGTATATGCGACCGGTTTGCCGTCAGCGATGTCGCTAAGGAACTGGACATGGAGATTCATTTGGAGTATCATCTTATGGATAATGAGGTGGAGGACTCAAGGAGGTTAAGAGGTGACAGCTTTAGGCCACCACATTTCTACACGAAGATAATGTGGCTCGTGTACAGATACCTGCTGATGATCATCAGAGATCCGAGGGTTCAACTGGTCCGTATACTACAGAAATTGGCTATAGCTTTAACAGCTGGCGTTTGTTTCTTGGGCACGCCCCGACTAACACAAGCCGGGGTTCAAGACGTCCAAGGGGCTCTGTTCATCATCATAGCTGAGAACACGTTCAGCCCCATGTATTCAGTTCTTCACATGTTTCCTGAGGAGTTTCCGTTGTTCAACAGAGAACTTAAGGCTGGACTGTACTCCACGCCGGTCTATTATACTGCCAGAATGATCGCTTTGTTCCCAGGGCTGTTGATAGAGCCGGTGCTGTTCACTGGTGTGGTGTATTGGCTCGCCGGGCTACGGTACAGTGCCTACGCCATCGGATTGACCATATTCATCTCGATTCTGGTGCTCAACGTCGCCATAGCGTGCGGTTCGTTCTTCTCGTGCGCTTTTGGCTCGATGCCGTTGGCGATCGCCTATCTGGTGCCCTTTGACTATTCCCTAATGATGACATCCGGGATATTCATCAAATTAAGCTCTATTCCTCGCTACGTGGCGTGGATCCGCTACCTGTCCTGGCTGATGTACTCGAACGAAGCGATGTCCATAGTCCAGTGGGACGGCGTTGAGAACATCACGTGTACAAACTCGAATTCAACTGGCGTTCCTTGCGTGAGCACCGGCGACGAAGTTCTCATGCAGTACGATTTCACGAGCAGCAACCTCTGGCTGGATATATCGGCGTTGCTGCTGCTCTACATCACCTTCCATCTCCTCGCGCTGCTGGCCCTTAGATACAGAACGAGAAGAAAATGA

Protein sequence (670 aa)

MGKKADTTKRSADNSPEKSESPQPLQSTSYELLPADLVYIDSGIKTSPVKYDSLYPEVEEVFGVPRSPRPCTLVWRDVTVHVKLKNGRLKRLVNNVSGIAKPGTLIALMGPSGAGKTTLMSALAHRSPFGTVIDGEIIMNGRPVCSYVDRESGYMHQDDIFAENLTVIEHLTVMARLRMDRRTSTVARKRRVNQLMRQLSLYESRFTRIGGLDGHKTLSGGERKRLAFATELLTDPGLLFCDEPTTGLDSSSALKLVSLLRASAAQGKTVICTIHQPSSELMAHFDKLVLLAEGRIAFAGNASAALGFFESLGYHCPLTYNPTDYFIKVLALTPGSEAASRHAIKSICDRFAVSDVAKELDMEIHLEYHLMDNEVEDSRRLRGDSFRPPHFYTKIMWLVYRYLLMIIRDPRVQLVRILQKLAIALTAGVCFLGTPRLTQAGVQDVQGALFIIIAENTFSPMYSVLHMFPEEFPLFNRELKAGLYSTPVYYTARMIALFPGLLIEPVLFTGVVYWLAGLRYSAYAIGLTIFISILVLNVAIACGSFFSCAFGSMPLAIAYLVPFDYSLMMTSGIFIKLSSIPRYVAWIRYLSWLMYSNEAMSIVQWDGVENITCTNSNSTGVPCVSTGDEVLMQYDFTSSNLWLDISALLLLYITFHLLALLALRYRTRRK

Corresponding sequences in KAIKObase version 1

BMgn002923 BMgn002924

Domains and motifs

Database	ID	Description	Start	End	Evalue	InterPro ID
PANTHER	PTHR19241	-	71	661	0.0	-
PANTHER	PTHR19241:SF340	-	71	661	0.0	-
CDD	cd03213	ABCG_EPDR	72	300	9.4e-70	-
Gene3D	3.40.50.300	-	72	309	2.5e-52	-
ProSiteProfiles	PS50893	ATP-binding cassette, ABC transporter-type domain profile.	73	318	16.473	IPR003439
SUPERFAMILY	SSF52540	-	73	317	7.4e-44	IPR027417
Pfam	PF00005	ABC transporter	94	245	9.1e-22	IPR003439
SMART	SM00382	-	102	295	1.1e-13	IPR003593
ProSitePatterns	PS00211	ABC transporters family signature.	218	232	-	IPR017871
Pfam	PF01061	ABC-2 type transporter	394	604	4.8e-33	IPR013525

InterPro assignment

InterPro ID	InterPro description
IPR003439	ABC transporter-like
IPR003593	AAA+ ATPase domain
IPR013525	ABC-2 type transporter
IPR017871	ABC transporter, conserved site
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Gene ontology (GO) assignment

GO category	GO ID	GO description
molecular function	GO:0005524	ATP binding
cellular component	GO:0016020	membrane
molecular function	GO:0016887	ATPase activity

Species	Accession
Danaus plexippus	DPOGS200174
Heliconius melpomene	HMEL035243g1.t1 HMEL035243g1.t2
Manduca sexta	XP_030034542.1
Plutella xylostella	g24525.t1
Spodoptera frugiperda (corn)	GSSPFG00024692001.1-PA
Spodoptera frugiperda (rice)	SFRICE007739-PA
Acyrthosiphon pisum	XP_003246086.1
Aedes aegypti	AAEL021570-PA
Anopheles gambiae	AGAP000506-PA
Apis mellifera	-
Drosophila melanogaster	FBpp0075149
Tribolium castaneum	NP_001306193.1
Homo sapiens	NP_001244315.1 NP_001335914.1 NP_001335915.1 NP_001335916.1 NP_001335917.1 NP_001335918.1 NP_004818.2 XP_005263412.1 XP_011530722.1 XP_016864341.1
Mus musculus	-

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value (transcripts per million (TPM))
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO05903:

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value with log₁₀ conversion (value of transcripts per million (TPM) plus 1 is used to avoid negative output)
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis