Position
| Chromosome | chr5 |
| Start | 3414130 |
| End | 3439888 |
| Strand | + |
view in Gbrowse: chr5:3414130..3439888
Most similar sequence in NCBI nr database
| Accession | Description | E-value | Score |
|---|---|---|---|
| XP_028028319.1 | protein scarlet-like isoform X1 | 0.0 | 1332 |
ORF sequence (1935 bp)
ATGAAAGAATACAATCTTAAGCTACCCACGCGCAATGTCCTCACCGGAGCCGTGGTCAACTGGGAGGACGACGAAATGGGAGTGATGGGAGATAGCCCGGAGAATCTGACATTAGCTTGGAAGGACTTATCTGTGTTTAGAAAGAAGAAGATACACACTAGCATGTGGAGATCGGCGGTCTATGAAGAGGTTAAAGTGTTGCATGGAGTAAGCGGCAGTGTCTCGTCCGGAAATCTGGTGGCGTTAATGGGTTCAAGCGGGGCCGGAAAAACCACACTCTTGGCCGCCATCAGCCGTCGTGACAAGAGCGCTCTGACAGGCTACCTCATGCTAAATGGAAGATTAGCCGGCGCTGACCTGATCGCCAGGATCTCAGGCTTCGTGCCTCAGGAGGACTTGGCAATCGAAGATCTCACCGTAGCTGAGCATATGGAGTTCATGGCGCGTCTCATGATGGACAAACGGTCAACCAAAATAATGAGAGCCAAAAGAGTCGAACAGTTGCTTGGCGAACTTGGTGTTATGAGCTGCACGAAGACTAAGCTGAAGGCGTTGTCTGGAGGCGAAAGGAAGAGGGTCGCTTTGGCTGTACAGCTTCTAAACGACCCGCCCATTCTCTTCTGCGATGAGCCAACAACGGGGCTGGACAGTTGGGCTGCGAGCGCCGTGGTGTCCAGGTTAAGGAAGCTGGCGATCGGTGGCAAACTAGTCATATGCTCAGTCCACCAGCCGGCGTCAGGAGTGTTCGAGATGTTCCACCAGATTGTGTTTTTGGCGAACGGCCGAACCGCCTTCCATGGAACCATTGCACAAGCGGACCAGTTCTTTGGATCGTTAAACTACAAGTGTCCGCTTGGTTTCAACGCTGCCGAATACTATGTATCCCTACTAGGAATCCAGATCGGTAAAGAGTCAGAGAGCCGAGAGAGAATTAGGCGGATCTGCGACGAATATCACCGGTCGGACATCGCTGCCGAGATTGAGGCTAGAGTTGGAGAAGTACATGATGAAGTCGATTACTTTAATGGAACTCTTGATGAGAAGAACGAATATTTCGAGAAATATCTCACCCTAGTCAAAGTTAACTATTTCGTCCAATTCTATTGGTTGATGTGGAGAAACATTCAGCAGATGAAACACAATAGTACAATATGGATCGCAGAATTTTTATTGCTCATGTTTGTCGGCTTCATAATTTCCTTCCCCTACATCGGACACTTCAAAGAGCTTGACCAACGTGACATTCAGAACGTGGAAGGTTTGCTGTACCTAACCATCACAGAGACGATATTCTTGTTCATCTACGCCGTTTTCATCACTTTCCCCAGTGAGGTTCCCATACTACTGAGAGAGACTGCCAGTGGATTGTATTCACCGCTGCCATACTACTTATCGAAGATGATATTTTGGATACCTCGCGCTGTTATTGAGCCCGTTCTGTTCGGTTCCCTCATATTTATTGTGGCGGAGCTTCGTGGCGGTTTCGTCGGCTGGCTAGGATTCTGTTTCGTCTGTGTTCTTTGTGCTAACTACGCCAATGCATACGGATCTTTTTTGTCGTCTGTCTTCGACAAAATGGAAACCGCTGCACTGGTATCCGTGCCCTTCGACCTCATCGGGACAATGTTCTCTGGATTATACCTCAACCTTGGAAGTGTCTCCCCGTATTTCTCGTGGCTTCGTTTTGTTTCAGCCTTTTACTATGGCATCGAATCCATATCCATCCTCCAATGGGATTCCATAGAGTCCATCGACTGCGTCAAACTCCCGGGTATACCTTGCATCAAAACCGGTCCTGACGTTTTGAACAGATACGGCTACTCCGAATCTCATTTCTGGAGGAACTGTTGTTGTTTAGCGACGATGTATTGTGTAGCGCATTTTGTAGCTTTTATTATGGTGATAAAAAGAAGTAGAGGCACGCCCGTTTACTGA
Protein sequence (644 aa)
MKEYNLKLPTRNVLTGAVVNWEDDEMGVMGDSPENLTLAWKDLSVFRKKKIHTSMWRSAVYEEVKVLHGVSGSVSSGNLVALMGSSGAGKTTLLAAISRRDKSALTGYLMLNGRLAGADLIARISGFVPQEDLAIEDLTVAEHMEFMARLMMDKRSTKIMRAKRVEQLLGELGVMSCTKTKLKALSGGERKRVALAVQLLNDPPILFCDEPTTGLDSWAASAVVSRLRKLAIGGKLVICSVHQPASGVFEMFHQIVFLANGRTAFHGTIAQADQFFGSLNYKCPLGFNAAEYYVSLLGIQIGKESESRERIRRICDEYHRSDIAAEIEARVGEVHDEVDYFNGTLDEKNEYFEKYLTLVKVNYFVQFYWLMWRNIQQMKHNSTIWIAEFLLLMFVGFIISFPYIGHFKELDQRDIQNVEGLLYLTITETIFLFIYAVFITFPSEVPILLRETASGLYSPLPYYLSKMIFWIPRAVIEPVLFGSLIFIVAELRGGFVGWLGFCFVCVLCANYANAYGSFLSSVFDKMETAALVSVPFDLIGTMFSGLYLNLGSVSPYFSWLRFVSAFYYGIESISILQWDSIESIDCVKLPGIPCIKTGPDVLNRYGYSESHFWRNCCCLATMYCVAHFVAFIMVIKRSRGTPVY
Domains and motifs
| Database | ID | Description | Start | End | Evalue | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 46 | 285 | 17.3 | IPR003439 |
| PANTHER | PTHR19241 | - | 49 | 632 | 4.4e-139 | - |
| PANTHER | PTHR19241:SF340 | - | 49 | 632 | 4.4e-139 | - |
| Gene3D | 3.40.50.300 | - | 58 | 277 | 1.1e-48 | - |
| SUPERFAMILY | SSF52540 | - | 59 | 281 | 5.7e-42 | IPR027417 |
| Pfam | PF00005 | ABC transporter | 67 | 212 | 1.2e-22 | IPR003439 |
| SMART | SM00382 | - | 76 | 262 | 6.0e-11 | IPR003593 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 185 | 199 | - | IPR017871 |
| Pfam | PF01061 | ABC-2 type transporter | 366 | 576 | 3.2e-27 | IPR013525 |
InterPro assignment
| InterPro ID | InterPro description |
|---|---|
| IPR003439 | ABC transporter-like |
| IPR003593 | AAA+ ATPase domain |
| IPR013525 | ABC-2 type transporter |
| IPR017871 | ABC transporter, conserved site |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Gene ontology (GO) assignment
| GO category | GO ID | GO description |
|---|---|---|
| molecular function | GO:0005524 | ATP binding |
| cellular component | GO:0016020 | membrane |
| molecular function | GO:0016887 | ATPase activity |
| Species | Accession |
|---|---|
| Danaus plexippus | DPOGS201427 |
| Heliconius melpomene | HMEL009081g1.t1 |
| Manduca sexta | XP_030037778.1 XP_030037779.1 |
| Plutella xylostella | g13023.t1 |
| Spodoptera frugiperda (corn) | GSSPFG00013663001-PA |
| Spodoptera frugiperda (rice) | SFRICE004888-PA |
| Acyrthosiphon pisum | XP_016663327.1 XP_029345416.1 XP_029345417.1 |
| Aedes aegypti | - |
| Anopheles gambiae | - |
| Apis mellifera | XP_006559103.2 XP_006559106.2 XP_016772097.2 XP_016772098.2 XP_016772099.2 XP_026301187.1 |
| Drosophila melanogaster | - |
| Tribolium castaneum | - |
| Homo sapiens | - |
| Mus musculus | - |