Position
| Chromosome | chr5 |
| Start | 2561764 |
| End | 2566037 |
| Strand | - |
view in Gbrowse: chr5:2561764..2566037
Most similar sequence in NCBI nr database
| Accession | Description | E-value | Score |
|---|
| XP_021207726.1 | ATP-binding cassette sub-family A member 5 isoform X2 | 0.0 | 781 |
ORF sequence (1125 bp)
ATGGACACGTTTGGCGAATATTTGCTCGCTTTGAACGTAACTAAAAAGATGTCCGGTTATTACGTTGTACACAACGTGTACTTGGGCATGAGGAAGGGGGAGATTGTAGCACTTTCCGGACTGAAAAGGCACGGCAGATTAACGTTTTGCCAGGTTCTGGCCGGGCACTTAATGCCGAGTAGAGGGCAATTGCAGTGCATGTCGCAGTGGAGCTTAAAGCGACAACCTCATTTGTATTGCCAGCAAATTGCAATTAGTTGTTCGGAAGTGTCGCTTCCTACGTGGATGACGGCATACGACGCTCTAGAACTAATCGGAACATTGCGAGGTGTCCCCAAGGATCATATTAAGCGACAATTGAATGACCTTATCGAAGCTTTAGATTTATTGGATTTAGCCCATACAAGGATTAGCCGGATGCTATCAGCTGATCGTAGCCGTGTCCGTTTCGCGGCTGCCATTATTGGCGCACCGCCTATATTAATATTGGACGAATGCACGGTCTATCAAAAGTTCTTCGTACAACGAGCAATGTATTCGATATTATACGATTTGAAAAAGAAGGGACATGGTTTATTGATTAGTTCTAGCATTGTAGAATCTCATCTACCTATGACCAACCGTTTGGCTTTCATCATAGATGGAACCACGTACGACATCGGTACTGTAGATAGCTTAGTGGATAGGTACAGCCAGAAAGGGTATACTGTTGTTGTGCATCTAAAAGACGACGTGGACGTTACGAAAATGTTCGGAAATTACTTTGATAATTTCATAATCAACGATACGTCTGAGGTGCTGGTCAACGTTCAAATTTTAGACAGTTTGAACTGGATGGAAGTGTTTGATAGAATGGAAAAATTGAAAACCAACAACGTTCAAGTATACTCATACGTCGTCACCGAGATACCCATCGATTTTATTTACAATTCGATTTTAAGCAAAGAACAAGGGAATAGAGTGGTCGAGGATCTATTCTCGTATTCTTGGTTAAAGACAATACTGCCGCGTAAATTGAAACGAAGCCCTTCACAGCGTGCACTCCAGGCGCTCAGTGCTTTTGAACCAAAATACGCCATAAACACTTTGAAGGAATTGCCTTGGTCTGTTATATTTCATAGGTAG
Protein sequence (374 aa)
MDTFGEYLLALNVTKKMSGYYVVHNVYLGMRKGEIVALSGLKRHGRLTFCQVLAGHLMPSRGQLQCMSQWSLKRQPHLYCQQIAISCSEVSLPTWMTAYDALELIGTLRGVPKDHIKRQLNDLIEALDLLDLAHTRISRMLSADRSRVRFAAAIIGAPPILILDECTVYQKFFVQRAMYSILYDLKKKGHGLLISSSIVESHLPMTNRLAFIIDGTTYDIGTVDSLVDRYSQKGYTVVVHLKDDVDVTKMFGNYFDNFIINDTSEVLVNVQILDSLNWMEVFDRMEKLKTNNVQVYSYVVTEIPIDFIYNSILSKEQGNRVVEDLFSYSWLKTILPRKLKRSPSQRALQALSAFEPKYAINTLKELPWSVIFHR
Domains and motifs
| Database | ID | Description | Start | End | Evalue | InterPro ID |
|---|
| Gene3D | 3.40.50.300 | - |
7 | 245 | 4.8e-28 |
- |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. |
8 | 239 | 14.819 |
IPR003439 |
| SUPERFAMILY | SSF52540 | - |
11 | 230 | 1.7e-27 |
IPR027417 |
| PANTHER | PTHR42711 | - |
12 | 312 | 1.3e-31 |
- |
| Pfam | PF00005 | ABC transporter |
24 | 167 | 6.0e-12 |
IPR003439 |
InterPro assignment
| InterPro ID | InterPro description |
|---|
| IPR003439 | ABC transporter-like |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Gene ontology (GO) assignment
| GO category | GO ID | GO description |
|---|
| molecular function | GO:0005524 | ATP binding |
| molecular function | GO:0016887 | ATPase activity |